Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(488)		   Primates
(5)		   Rodents
(260)		   Mammals
(16)		   Vertebrates
(44)		   Invertebrates
(60)		   Plants
(139)		   Bacteria
(93)		   Viruses
(5)		   Phages
(0)		   Unclassified
(5)		   All
(1,115)		  
  SAGE NlaIII
(7)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(1)		   GeneChip
(502)		   Tiling Array
(48)		   cDNA Array
(138)		   Oligo Array
(334)		   Bead Array
(46)		   Protein Array
(0)		   Antibody
(1)		   RT-PCR
(1)		   HT-Seq
(35)		   Other
(2)		   All
(1,115)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Evaluation of the amplicons for detection of known CNVs using Cs22 HR-CGH (GSE12731) [Oligo Array] YALE/NIMBLEGEN_HUMAN-CHR22_372K_v1.0 (GPL3448) Yale University School of Medicine 2008-09-10 Homo sapiens
Homo sapiens		 3,351,168
(372,352 x 9) 		9 by_platform
by_series
2 Evaluation of Wpa-generated amplicons for SNP typing (allele bias), locus bias, and detection of known CNVs (GSE12751) [Oligo Array] YALE/NIMBLEGEN_HUMAN-CHR22_372K_v1.0 (GPL3448) Yale University School of Medicine 2008-09-11 Homo sapiens
Homo sapiens		 3,351,168
(372,352 x 9) 		9 by_platform
by_series
3 A methodology for the estimation of DNA methylation levels based on microarray derived MeDIP-enrichment (GSE12096) [Oligo Array] HG17_Human_60mer_1in2 (GPL6602) Yale University 2008-07-11 Homo sapiens
Homo sapiens		 74,728
(37,364 x 2) 		2 by_platform
by_series
4 Human Embryonic Stem Cell Sublines (GSE12119) [Oligo Array] WiCell 2006-07-27 HG18 WG CGH (GPL7737) WiCell 2008-07-15 Homo sapiens
Homo sapiens		 781,868
(390,934 x 2) 		2 by_platform
by_series
5 Human Embryonic Stem Cell Sublines (GSE12119) [Oligo Array] NimbleGen High Density CGH (GPL6545) WiCell 2008-07-15 Homo sapiens
Homo sapiens		 390,934
(390,934 x 1) 		1 by_platform
by_series
6 Human Embryonic Stem Cell Sublines (GSE12119) [Oligo Array] Nimblegen WiCell HG18 WG CGH array (GPL7057) WiCell 2008-07-15 Homo sapiens
Homo sapiens		 390,934
(390,934 x 1) 		1 by_platform
by_series
7 Analysis of HeLa cells after transfection with miR-1, miR-124 and miR-181. (GSE11968) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) Whitehead Institute 2008-07-02 Homo sapiens
Homo sapiens		 135,660
(45,220 x 3) 		3 by_platform
by_series
8 The impact of microRNAs on protein output (GSE12075) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) Whitehead Institute 2008-07-10 Homo sapiens
Homo sapiens		 135,660
(45,220 x 3) 		3 by_platform
by_series
9 p53-repressed miRNAs are Involved with E2F in a Feed Forward Loop Promoting Proliferation (GSE12450) [Oligo Array] WIS_Exiqon_miRCURYâ„¢ LNA Array (v.8.1) (GPL7168) Weizmann Institute of Science 2008-08-14 Homo sapiens
Homo sapiens		 5,364
(447 x 12) 		12 by_platform
by_series
10 Control of Virulence Gene Expression in Citrobacter rodentium by Trascription Factor RegA (GSE12876) [Oligo Array] WEHI_Citrobacterrodentium_15k_V1.0 (GPL7345) Walter and Eliza Hall Institute 2008-09-22 Citrobacter rodentium
Citrobacter rodentium		 125,952
(15,744 x 8) 		8 by_platform
by_series
11 Interactions of cytokines in peripheral blood cells from Systemic Lupus Erythematosus (GSE12374) [Oligo Array] Hitachisoft AceGene Human Oligo Chip 30K 1 Chip Version (GPL1291) Wakayama Medical University 2008-08-07 Homo sapiens
Homo sapiens		 515,712
(30,336 x 17) 		17 by_platform
by_series
12 Listeria monocytogenes SOS response determined after mitomycin C exposure (GSE12634) [Oligo Array] TIFN_Listeria monocytogenes EGD-e_15K_v1.0 (GPL7235) Wageningen University 2008-09-01 Listeria monocytogenes EGD-e
Listeria monocytogenes EGD-e		 251,904
(15,744 x 16) 		16 by_platform
by_series
13 Gene expression profiles following TP53 downregulation (GSE12553) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) Vrije Universiteit Medical Center 2008-08-26 Homo sapiens
Homo sapiens		 1,447,040
(45,220 x 32) 		32 by_platform
by_series
14 NMD inhibition fails to identify tumour suppressor genes in microsatellite stable gastric cancer cell lines (GSE12928) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) Vrije Universiteit Medical Center 2008-09-25 Homo sapiens
Homo sapiens		 542,640
(45,220 x 12) 		12 by_platform
by_series
15 Investigation of a patient with a partial 16q trisomy (GSE12741) [Oligo Array] VUMC Agilent-019445 ch16_199k_plus44k (GPL7276) Vrije Universiteit Medical Center 2008-09-11 Homo sapiens
Homo sapiens		 243,504
(243,504 x 1) 		1 by_platform
by_series
16 Colonic tissues from an acute TNBS-induced colitis model in SJL mice. (GSE12139) [Oligo Array] VUMC MACF mouse 22K v9 (GPL2858) Vrije Universiteit Medical Center 2008-07-17 Mus musculus
Mus musculus		 178,176
(22,272 x 8) 		8 by_platform
by_series
17 NMD inhibition fails to identify tumour suppressor genes in microsatellite stable gastric cancer cell lines (GSE12928) [Oligo Array] Agilent-014950 Human Genome CGH Microarray 4x44K (Feature Number version) (GPL5477) Vrije Universiteit Medical Center 2008-09-25 Homo sapiens
Homo sapiens		 90,440
(45,220 x 2) 		2 by_platform
by_series
18 CGH analysis of two components of carcinosarcoma (GSE12958) [Oligo Array] Agilent-014950 Human Genome CGH Microarray 4x44K (Feature Number version) (GPL5477) Vrije Universiteit Medical Center 2008-09-29 Homo sapiens
Homo sapiens		 90,440
(45,220 x 2) 		2 by_platform
by_series
19 Chromosomal aberrations in benign and malignant salivary gland myoepitheliomas (GSE12951) [Oligo Array] Agilent-014950 Human Genome CGH Microarray 4x44K (Feature Number version) (GPL5477) Vrije Universiteit Medical Center 2008-09-27 Homo sapiens
Homo sapiens		 45,220
(45,220 x 1) 		1 by_platform
by_series
20 Dox-regulated Notch4 overexpression in mouse ES cells redirects hemagioblasts to a cardiac fate. (GSE12425) [Oligo Array] GE Healthcare/Amersham Biosciences CodeLinkâ„¢ Mouse Whole Genome Bioarray (GPL2897) VistaGen Therapeutics 2008-08-12 Mus musculus
Mus musculus		 1,377,600
(45,920 x 30) 		30 by_platform
by_series
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