Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(10,091)		   Primates
(82)		   Rodents
(9,179)		   Mammals
(331)		   Vertebrates
(473)		   Invertebrates
(638)		   Plants
(2,314)		   Bacteria
(1,189)		   Viruses
(12)		   Phages
(0)		   Unclassified
(85)		   All
(24,394)		  
  SAGE NlaIII
(31)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(14)		   GeneChip
(7,637)		   Tiling Array
(869)		   cDNA Array
(5,038)		   Oligo Array
(9,309)		   Bead Array
(1,370)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(83)		   HT-Seq
(0)		   Other
(27)		   All
(24,394)		  
  brain
(106)		   blood
(508)		   connective
(254)		   reproductive
(220)		   muscular
(6)		   digestive
(57)		   liver
(4,859)		   lung
(93)		   urinary
(10)		   endo/exo-crine
(429)		   embryo
(211)		   adult aerial structure
(18)		   young aerial structure
(44)		   root
(14)		   meristem/growing tissue
(4)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(175)		   unclassified
(2,301)		   all
(9,309)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM220166 Tig3 human fibroblast cells, LaminB1 DamID, platform chr4 392,714 Netherlands Cancer Institute 2007-08-22 [Oligo Array] NKI/VanSteensel_HSA_390k_chr4_v070809 (GPL5729) genomic Homo sapiens
Homo sapiens		 skin Tig3 Human fibroblast cells, expressing LaminB1-Dam Tig3 Human fibroblast cells, expressing Dam
2 GSM220167 Tig3 human fibroblast cells, Emerin DamID, platform chr4 392,714 Netherlands Cancer Institute 2007-08-22 [Oligo Array] NKI/VanSteensel_HSA_390k_chr4_v070809 (GPL5729) genomic Homo sapiens
Homo sapiens		 skin Tig3 Human fibroblast cells, expressing Emerin-Dam Tig3 Human fibroblast cells, expressing Dam
3 GSM230050 H3K4me3 kidney NimbleGen Mouse Chr11:36912182-99375819 tiling array array number 59251 390,611 Ludwig Institute for Cancer Research 2007-09-17 [Oligo Array] Nimblegen single array covering Mouse Chr11:36912182-99375819 (GPL5875) genomic Mus musculus
Mus musculus		 kidney Chromatin immunoprecipitated DNA from kidney cells using H3K4me3 antibody Input Chromatin kidney cells.
4 GSM230051 H3K4me3 heart NimbleGen Mouse Chr11:36912182-99375819 tiling array array number 59358 390,611 Ludwig Institute for Cancer Research 2007-09-17 [Oligo Array] Nimblegen single array covering Mouse Chr11:36912182-99375819 (GPL5875) genomic Mus musculus
Mus musculus		 heart Chromatin immunoprecipitated DNA from heart cells using H3K4me3 antibody Input Chromatin heart cells.
5 GSM230052 H3K4me3 brain NimbleGen Mouse Chr11:36912182-99375819 tiling array array number 61037 390,611 Ludwig Institute for Cancer Research 2007-09-17 [Oligo Array] Nimblegen single array covering Mouse Chr11:36912182-99375819 (GPL5875) genomic Mus musculus
Mus musculus		 cerebrum Chromatin immunoprecipitated DNA from brain cells using H3K4me3 antibody Input Chromatin brain cells.
6 GSM230053 H3K4me3 liver NimbleGen Mouse Chr11:36912182-99375819 tiling array array number 61062 390,611 Ludwig Institute for Cancer Research 2007-09-17 [Oligo Array] Nimblegen single array covering Mouse Chr11:36912182-99375819 (GPL5875) genomic Mus musculus
Mus musculus		 liver/hepato Chromatin immunoprecipitated DNA from liver cells using H3K4me3 antibody Input Chromatin liver cells.
7 GSM211723 Dsim011_female_rep1 390,209 NIDDK, NIH 2007-07-19 [Oligo Array] Nimblegen Dsim expression custom array/2005-06-03_D_simulans_50mer (GPL4632) RNA Drosophila simulans
Drosophila simulans		 unclassified source_name:Drosophila simulans w[501] adult female title:Dsim011_female_rep1 description:Biological replicate 1 of 3.
8 GSM211724 Dsim011_female_rep2 390,209 NIDDK, NIH 2007-07-19 [Oligo Array] Nimblegen Dsim expression custom array/2005-06-03_D_simulans_50mer (GPL4632) RNA Drosophila simulans
Drosophila simulans		 unclassified source_name:Drosophila simulans w[501] adult female title:Dsim011_female_rep2 description:Biological replicate 2 of 3.
9 GSM211725 Dsim011_female_rep3 390,209 NIDDK, NIH 2007-07-19 [Oligo Array] Nimblegen Dsim expression custom array/2005-06-03_D_simulans_50mer (GPL4632) RNA Drosophila simulans
Drosophila simulans		 unclassified source_name:Drosophila simulans w[501] adult female title:Dsim011_female_rep3 description:Biological replicate 3 of 3.
10 GSM211726 Dsim011_male_rep1 390,209 NIDDK, NIH 2007-07-19 [Oligo Array] Nimblegen Dsim expression custom array/2005-06-03_D_simulans_50mer (GPL4632) RNA Drosophila simulans
Drosophila simulans		 unclassified source_name:Drosophila simulans w[501] adult male title:Dsim011_male_rep1 description:Biological replicate 1 of 2.
11 GSM211727 Dsim011_male_rep2 390,209 NIDDK, NIH 2007-07-19 [Oligo Array] Nimblegen Dsim expression custom array/2005-06-03_D_simulans_50mer (GPL4632) RNA Drosophila simulans
Drosophila simulans		 unclassified source_name:Drosophila simulans w[501] adult male title:Dsim011_male_rep2 description:Biological replicate 2 of 2.
12 GSM211461 CD4+ DNAse hypersitivity_2006-02-27_Crawford_HG17_Set01_2 389,359 National Cancer Institute 2007-07-18 [Oligo Array] 2006-02-27_Crawford_HG17_Set01 (GPL5579) genomic Homo sapiens
Homo sapiens		 lymphnode CD4+ DNAse-treated genomic DNA, replicate #2 CD4+ input genomic DNA, replicate #2
13 GSM211462 CD4+ DNAse hypersitivity_2006-02-27_Crawford_HG17_Set02_2 389,359 National Cancer Institute 2007-07-18 [Oligo Array] 2006-02-27_Crawford_HG17_Set02 (GPL5580) genomic Homo sapiens
Homo sapiens		 lymphnode CD4+ DNAse-treated genomic DNA, replicate #2 CD4+ input genomic DNA, replicate #2
14 GSM211463 CD4+ DNAse hypersitivity_2006-02-27_Crawford_HG17_Set03_2 389,359 National Cancer Institute 2007-07-18 [Oligo Array] 2006-02-27_Crawford_HG17_Set03 (GPL5581) genomic Homo sapiens
Homo sapiens		 lymphnode CD4+ DNAse-treated genomic DNA, replicate #2 CD4+ input genomic DNA, replicate #2
15 GSM211464 CD4+ DNAse hypersitivity_2006-02-27_Crawford_HG17_Set04_2 389,359 National Cancer Institute 2007-07-18 [Oligo Array] 2006-02-27_Crawford_HG17_Set04 (GPL5582) genomic Homo sapiens
Homo sapiens		 lymphnode CD4+ DNAse-treated genomic DNA, replicate #2 CD4+ input genomic DNA, replicate #2
16 GSM211465 CD4+ DNAse hypersitivity_2006-02-27_Crawford_HG17_Set05_2 389,359 National Cancer Institute 2007-07-18 [Oligo Array] 2006-02-27_Crawford_HG17_Set05 (GPL5583) genomic Homo sapiens
Homo sapiens		 lymphnode CD4+ DNAse-treated genomic DNA, replicate #2 CD4+ input genomic DNA, replicate #2
17 GSM211466 CD4+ DNAse hypersitivity_2006-02-27_Crawford_HG17_Set06_2 389,359 National Cancer Institute 2007-07-18 [Oligo Array] 2006-02-27_Crawford_HG17_Set06 (GPL5584) genomic Homo sapiens
Homo sapiens		 lymphnode CD4+ DNAse-treated genomic DNA, replicate #2 CD4+ input genomic DNA, replicate #2
18 GSM211467 CD4+ DNAse hypersitivity_2006-02-27_Crawford_HG17_Set07_2 389,359 National Cancer Institute 2007-07-18 [Oligo Array] 2006-02-27_Crawford_HG17_Set07 (GPL5585) genomic Homo sapiens
Homo sapiens		 lymphnode CD4+ DNAse-treated genomic DNA, replicate #2 CD4+ input genomic DNA, replicate #2
19 GSM211468 CD4+ DNAse hypersitivity_2006-02-27_Crawford_HG17_Set08_2 389,359 National Cancer Institute 2007-07-18 [Oligo Array] 2006-02-27_Crawford_HG17_Set08 (GPL5586) genomic Homo sapiens
Homo sapiens		 lymphnode CD4+ DNAse-treated genomic DNA, replicate #2 CD4+ input genomic DNA, replicate #2
20 GSM211469 CD4+ DNAse hypersitivity_2006-02-27_Crawford_HG17_Set09_2 389,359 National Cancer Institute 2007-07-18 [Oligo Array] 2006-02-27_Crawford_HG17_Set09 (GPL5587) genomic Homo sapiens
Homo sapiens		 lymphnode CD4+ DNAse-treated genomic DNA, replicate #2 CD4+ input genomic DNA, replicate #2
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