Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(22,352)

Phages
(0)

All
(35,165)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

Oligo Array
(9,609)

Protein Array
(0)

Antibody
(0)

adult aerial structure
(75)

young aerial structure
(10)

root
(186)

meristem/growing tissue
(74)

flower/sexual organ
(24)

seed/fruit/grain
(24)

pooled
(3,546)

unclassified
(2,328)

all
(9,609)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM984848	HumanHT1080 clone11 LaminB1	2,151,683	Netherlands Cancer Institute	2012-08-13	[Oligo Array] NimbleGen HD2 Human whole genome custom array 2.1M [090310_LP_til_HX1] (GPL10559)	genomic	Homo sapiens	skin	Dam-only DamID DNA from HT1080 Dam-LaminB1 DamID DNA from HT1080
2	GSM991246	46,XY 5mC immunoprecipitated DNA Sample 1 IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5mC immunoprecipitated DNA Input untreated DNA title:46,XY 5mC immunoprecipitated DNA Sample 1 IF description:Methylation array
3	GSM991247	46,XY 5mC immunoprecipitated DNA Sample 2 IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5mC immunoprecipitated DNA Input untreated DNA title:46,XY 5mC immunoprecipitated DNA Sample 2 IF description:Methylation array
4	GSM991248	46,XY 5mC immunoprecipitated DNA Sample 3 IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5mC immunoprecipitated DNA Input untreated DNA title:46,XY 5mC immunoprecipitated DNA Sample 3 IF description:Methylation array
5	GSM991249	47,XY,+8 5mC immunoprecipitated DNA Sample 4 IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5mC immunoprecipitated DNA Input untreated DNA title:47,XY,+8 5mC immunoprecipitated DNA Sample 4 IF description:Methylation array
6	GSM991250	47,XY,+8 5mC immunoprecipitated DNA Sample 5 IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5mC immunoprecipitated DNA Input untreated DNA title:47,XY,+8 5mC immunoprecipitated DNA Sample 5 IF description:Methylation array
7	GSM991251	47,XY,+8 5mC immunoprecipitated DNA Sample 6 IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5mC immunoprecipitated DNA Input untreated DNA title:47,XY,+8 5mC immunoprecipitated DNA Sample 6 IF description:Methylation array
8	GSM991252	46,XX 5mC immunoprecipitated DNA Sample 7 IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5mC immunoprecipitated DNA Input untreated DNA title:46,XX 5mC immunoprecipitated DNA Sample 7 IF description:Methylation array
9	GSM991253	46,XY 5mC immunoprecipitated DNA Sample 8 IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5mC immunoprecipitated DNA Input untreated DNA title:46,XY 5mC immunoprecipitated DNA Sample 8 IF description:Methylation array
10	GSM991254	46,XY 5hmC immunopreciptated DNA Sample 1hM IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5hmC immunopreciptated DNA Input untreated DNA title:46,XY 5hmC immunopreciptated DNA Sample 1hM IF description:Hydroxymethylation array
11	GSM991255	47,XY,+8 5hmC immunopreciptated DNA Sample 2hM IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5hmC immunopreciptated DNA Input untreated DNA title:47,XY,+8 5hmC immunopreciptated DNA Sample 2hM IF description:Hydroxymethylation array
12	GSM991256	47,XY,+8 5hmC immunopreciptated DNA Sample 3hM IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5hmC immunopreciptated DNA Input untreated DNA title:47,XY,+8 5hmC immunopreciptated DNA Sample 3hM IF description:Hydroxymethylation array
13	GSM991257	47,XY,+8 5hmC immunopreciptated DNA Sample 4hM IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5hmC immunopreciptated DNA Input untreated DNA title:47,XY,+8 5hmC immunopreciptated DNA Sample 4hM IF description:Hydroxymethylation array
14	GSM991258	46,XY 5hmC immunopreciptated DNA Sample 5hM IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5hmC immunopreciptated DNA Input untreated DNA title:46,XY 5hmC immunopreciptated DNA Sample 5hM IF description:Hydroxymethylation array
15	GSM991259	46,XY 5hmC immunopreciptated DNA Sample 6hM IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5hmC immunopreciptated DNA Input untreated DNA title:46,XY 5hmC immunopreciptated DNA Sample 6hM IF description:Hydroxymethylation array
16	GSM991260	46,XX 5hmC immunopreciptated DNA Sample 7hM IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5hmC immunopreciptated DNA Input untreated DNA title:46,XX 5hmC immunopreciptated DNA Sample 7hM IF description:Hydroxymethylation array
17	GSM991261	46,XY 5hmC immunopreciptated DNA Sample 8hM IF	2,137,191	Lund University	2012-08-23	[Oligo Array] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301)	genomic	Homo sapiens	unclassified	source_name:5hmC immunopreciptated DNA Input untreated DNA title:46,XY 5hmC immunopreciptated DNA Sample 8hM IF description:Hydroxymethylation array
18	GSM990672	Human HT1080 LaminB1 replicate1	2,134,741	Netherlands Cancer Institute	2012-08-22	[Oligo Array] NimbleGen HD2 Human whole genome custom array 2.1M [090310_LP_til_HX1] (GPL10559)	genomic	Homo sapiens	skin	Dam-LaminB1 DamID DNA from HT1080 Cells Dam-only DamID DNA from HT1080 Cells
19	GSM990673	Human HT1080 LaminB1 replicate2	2,134,741	Netherlands Cancer Institute	2012-08-22	[Oligo Array] NimbleGen HD2 Human whole genome custom array 2.1M [090310_LP_til_HX1] (GPL10559)	genomic	Homo sapiens	skin	Dam-only DamID DNA from HT1080 Cells Dam-LaminB1 DamID DNA from HT1080 Cells
20	GSM990674	Human HT1080 LaminA replicate1	2,134,741	Netherlands Cancer Institute	2012-08-22	[Oligo Array] NimbleGen HD2 Human whole genome custom array 2.1M [090310_LP_til_HX1] (GPL10559)	genomic	Homo sapiens	skin	Dam-LaminA DamID DNA from HT1080 Cells Dam-only DamID DNA from HT1080 Cells

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