Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(1,697)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(507)
  GeneChip
(441,758)
  Tiling Array
(24,730)
  cDNA Array
(109,124)
  Oligo Array
(288,250)
  Bead Array
(148,432)
  Protein Array
(5)
  Antibody
(1,287)
  RT-PCR
(6,509)
  HT-Seq
(64,850)
  Other
(13,899)
  All
(1,101,311)
 
  brain
(0)
  blood
(0)
  connective
(14,910)
  reproductive
(9,753)
  muscular
(5,544)
  digestive
(9,655)
  liver
(25,607)
  lung
(9,384)
  urinary
(4,884)
  endo/exo-crine
(0)
  embryo
(4,551)
  adult aerial structure
(4,560)
  young aerial structure
(1,402)
  root
(1,298)
  meristem/growing tissue
(584)
  flower/sexual organ
(1,159)
  seed/fruit/grain
(1,134)
  pooled
(17,460)
  unclassified
(0)
  all
(288,250)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1363713 Denit_N5-4_#12 44,951 LBNL 2014-04-07 [Oligo Array] Functional gene array for anaerobic Hanford 100H aquifer community (GPL18536) RNA unidentified
unidentified
unclassified source_name:Denitrifying column N5-4, day 295 title:Denit_N5-4_#12 description:This sample is a denitrifying aquifer community from Hanford 100H
2 GSM1363714 Ferment_S5-5_#14 44,951 LBNL 2014-04-07 [Oligo Array] Functional gene array for anaerobic Hanford 100H aquifer community (GPL18536) RNA unidentified
unidentified
unclassified source_name:Fermentative column S5-5, day 281 title:Ferment_S5-5_#14 description:This sample is a fermentative aquifer community from Hanford 100H
3 GSM1363757 Lmono5923_4h_TSB_rep1 14,230 University of Alberta 2014-04-07 [Oligo Array] NimbleGen Listeria monocytogenes 3K (GPL18538) RNA Listeria monocytogenes 08-5923
Listeria monocytogenes 08-5923
unclassified source_name:L. monocytogenes 08-5923 untreated title:Lmono5923_4h_TSB_rep1
4 GSM1363758 Lmono5923_4h_cclA_rep1 14,230 University of Alberta 2014-04-07 [Oligo Array] NimbleGen Listeria monocytogenes 3K (GPL18538) RNA Listeria monocytogenes 08-5923
Listeria monocytogenes 08-5923
unclassified source_name:L. monocytogenes 08-5923 treated title:Lmono5923_4h_cclA_rep1
5 GSM1363759 Lmono5923_4h_TSB_rep2 14,230 University of Alberta 2014-04-07 [Oligo Array] NimbleGen Listeria monocytogenes 3K (GPL18538) RNA Listeria monocytogenes 08-5923
Listeria monocytogenes 08-5923
unclassified source_name:L. monocytogenes 08-5923 untreated title:Lmono5923_4h_TSB_rep2
6 GSM1363760 Lmono5923_4h_cclA_rep2 14,230 University of Alberta 2014-04-07 [Oligo Array] NimbleGen Listeria monocytogenes 3K (GPL18538) RNA Listeria monocytogenes 08-5923
Listeria monocytogenes 08-5923
unclassified source_name:L. monocytogenes 08-5923 treated title:Lmono5923_4h_cclA_rep2
7 GSM1363761 Lmono5923_4h_TSB_rep3 14,230 University of Alberta 2014-04-07 [Oligo Array] NimbleGen Listeria monocytogenes 3K (GPL18538) RNA Listeria monocytogenes 08-5923
Listeria monocytogenes 08-5923
unclassified source_name:L. monocytogenes 08-5923 untreated title:Lmono5923_4h_TSB_rep3
8 GSM1363762 Lmono5923_4h_cclA_rep3 14,230 University of Alberta 2014-04-07 [Oligo Array] NimbleGen Listeria monocytogenes 3K (GPL18538) RNA Listeria monocytogenes 08-5923
Listeria monocytogenes 08-5923
unclassified source_name:L. monocytogenes 08-5923 treated title:Lmono5923_4h_cclA_rep3
9 GSM1363169 Apomictic_Plant1-Cy3 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera polyantha,unidentified
Boechera polyantha,unidentified
unclassified source_name:Apomictic_Plant1_CGH pooled reference sample (mixture of different genotypes) title:Apomictic_Plant1-Cy3
10 GSM1363170 Apomictic_Plant1-Cy5 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera polyantha,unidentified
Boechera polyantha,unidentified
unclassified source_name:Apomictic_Plant1_CGH pooled reference sample (mixture of different genotypes) title:Apomictic_Plant1-Cy5
11 GSM1363171 Apomictic_Plant2-Cy3 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera retrofracta,unidentified
Boechera retrofracta,unidentified
unclassified source_name:Apomictic_Plant2_CGH pooled reference sample (mixture of different genotypes) title:Apomictic_Plant2-Cy3
12 GSM1363172 Apomictic_Plant2-Cy5 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera retrofracta,unidentified
Boechera retrofracta,unidentified
unclassified source_name:Apomictic_Plant2_CGH pooled reference sample (mixture of different genotypes) title:Apomictic_Plant2-Cy5
13 GSM1363173 Apomictic_Plant3-Cy3 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera retrofracta,unidentified
Boechera retrofracta,unidentified
unclassified source_name:Apomictic_Plant3_CGH pooled reference sample (mixture of different genotypes) title:Apomictic_Plant3-Cy3
14 GSM1363174 Apomictic_Plant3-Cy5 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera retrofracta,unidentified
Boechera retrofracta,unidentified
unclassified source_name:Apomictic_Plant3_CGH pooled reference sample (mixture of different genotypes) title:Apomictic_Plant3-Cy5
15 GSM1363175 Apomictic_Plant4-Cy3 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera divaricarpa,unidentified
Boechera divaricarpa,unidentified
unclassified source_name:Apomictic_Plant4_CGH pooled reference sample (mixture of different genotypes) title:Apomictic_Plant4-Cy3
16 GSM1363176 Apomictic_Plant4-Cy5 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera divaricarpa,unidentified
Boechera divaricarpa,unidentified
unclassified source_name:Apomictic_Plant4_CGH pooled reference sample (mixture of different genotypes) title:Apomictic_Plant4-Cy5
17 GSM1363177 Apomictic_Plant5-Cy3 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera divaricarpa,unidentified
Boechera divaricarpa,unidentified
unclassified source_name:Apomictic_Plant5_CGH pooled reference sample (mixture of different genotypes) title:Apomictic_Plant5-Cy3
18 GSM1363178 Apomictic_Plant5-Cy5 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera divaricarpa,unidentified
Boechera divaricarpa,unidentified
unclassified source_name:Apomictic_Plant5_CGH pooled reference sample (mixture of different genotypes) title:Apomictic_Plant5-Cy5
19 GSM1363179 Apomictic_Plant6-Cy3 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera lignifera,unidentified
Boechera lignifera,unidentified
unclassified source_name:Apomictic_Plant6_CGH pooled reference sample (mixture of different genotypes) title:Apomictic_Plant6-Cy3
20 GSM1363180 Apomictic_Plant6-Cy5 719,345 IPK Gatersleben 2014-04-04 [Oligo Array] Nimblegen custom Boechera CGH array 100811_Boechera_TS_CGH (GPL17827) genomic Boechera lignifera,unidentified
Boechera lignifera,unidentified
unclassified source_name:Apomictic_Plant6_CGH pooled reference sample (mixture of different genotypes) title:Apomictic_Plant6-Cy5
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