Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(6,763)		   Primates
(0)		   Rodents
(3,704)		   Mammals
(0)		   Vertebrates
(0)		   Invertebrates
(0)		   Plants
(1,401)		   Bacteria
(0)		   Viruses
(0)		   Phages
(0)		   Unclassified
(0)		   All
(13,996)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(1)		   MPSS
(0)		   GeneChip
(6,764)		   Tiling Array
(0)		   cDNA Array
(3,605)		   Oligo Array
(3,107)		   Bead Array
(64)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(13,996)		  
  brain
(0)		   blood
(163)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(1,547)		   all
(3,107)		  
1   |   2   |   3   |   4   |   5      »      [156]
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM116361 Normal r4 Replicate 1 16,399 University of Chicago 2006-06-26 [Oligo Array] Zebrafish Oligonucleotide Array (Compugen) (GPL3721) RNA Danio rerio
Danio rerio		 cerebrum Danio rerio embryonic hindbrain
2 GSM116362 Hoxb1a-deficient r4 Replicate 1 16,399 University of Chicago 2006-06-26 [Oligo Array] Zebrafish Oligonucleotide Array (Compugen) (GPL3721) RNA Danio rerio
Danio rerio		 cerebrum Danio rerio embryonic hindbrain
3 GSM116363 Normal r4 replicate 2 16,399 University of Chicago 2006-06-26 [Oligo Array] Zebrafish Oligonucleotide Array (Compugen) (GPL3721) RNA Danio rerio
Danio rerio		 cerebrum Danio rerio embryonic hindbrain
4 GSM116364 Normal r2 replicate 2 16,399 University of Chicago 2006-06-26 [Oligo Array] Zebrafish Oligonucleotide Array (Compugen) (GPL3721) RNA Danio rerio
Danio rerio		 cerebrum Danio rerio embryonic hindbrain
5 GSM116365 Hoxb1a-deficient r4 Replicate 2 16,399 University of Chicago 2006-06-26 [Oligo Array] Zebrafish Oligonucleotide Array (Compugen) (GPL3721) RNA Danio rerio
Danio rerio		 cerebrum Danio rerio embryonic hindbrain
6 GSM116366 Normal r4 Replicate 3 16,399 University of Chicago 2006-06-26 [Oligo Array] Zebrafish Oligonucleotide Array (Compugen) (GPL3721) RNA Danio rerio
Danio rerio		 cerebrum Danio rerio embryonic hindbrain
7 GSM116367 Normal r2 replicate 3a 16,399 University of Chicago 2006-06-26 [Oligo Array] Zebrafish Oligonucleotide Array (Compugen) (GPL3721) RNA Danio rerio
Danio rerio		 cerebrum Danio rerio embryonic hindbrain
8 GSM116368 Normal r2 replicate 3b 16,399 University of Chicago 2006-06-26 [Oligo Array] Zebrafish Oligonucleotide Array (Compugen) (GPL3721) RNA Danio rerio
Danio rerio		 cerebrum Danio rerio embryonic hindbrain
9 GSM116369 Hoxb1a-deficient r4 Replicate 3 16,399 University of Chicago 2006-06-26 [Oligo Array] Zebrafish Oligonucleotide Array (Compugen) (GPL3721) RNA Danio rerio
Danio rerio		 cerebrum Danio rerio embryonic hindbrain
10 GSM109326 H3K4Me3_gastrula_1_Slide2 44,290 Whitehead Institute 2006-05-18 [Oligo Array] Zebrafish 44K oligo promoter array_Slide 2 of 2 (GPL3767) genomic Danio rerio
Danio rerio		 embryo H3K4Me3_gastrula_1_Slide2
11 GSM109328 H3K4Me3_gastrula_2_Slide2 44,290 Whitehead Institute 2006-05-18 [Oligo Array] Zebrafish 44K oligo promoter array_Slide 2 of 2 (GPL3767) genomic Danio rerio
Danio rerio		 embryo H3K4Me3_gastrula_2_Slide2
12 GSM109330 H3K4Me3_gastrula_3_Slide2 44,290 Whitehead Institute 2006-05-18 [Oligo Array] Zebrafish 44K oligo promoter array_Slide 2 of 2 (GPL3767) genomic Danio rerio
Danio rerio		 embryo H3K4Me3_gastrula_3_Slide2
13 GSM109323 H3K4Me3_gastrula_1_Slide1 44,290 Whitehead Institute 2006-05-18 [Oligo Array] Zebrafish 44K oligo promoter array_Slide 1 of 2 (GPL3766) genomic Danio rerio
Danio rerio		 embryo H3K4Me3_gastrula_1_Slide1
14 GSM109327 H3K4Me3_gastrula_2_Slide1 44,290 Whitehead Institute 2006-05-18 [Oligo Array] Zebrafish 44K oligo promoter array_Slide 1 of 2 (GPL3766) genomic Danio rerio
Danio rerio		 embryo H3K4Me3_gastrula_2_Slide1
15 GSM109329 H3K4Me3_gastrula_3_Slide1 44,290 Whitehead Institute 2006-05-18 [Oligo Array] Zebrafish 44K oligo promoter array_Slide 1 of 2 (GPL3766) genomic Danio rerio
Danio rerio		 embryo H3K4Me3_gastrula_3_Slide1
16 GSM107978 Expression of CfMNPV select ORFs, 0 hpi, Expt. 1 192 University of Guelph 2006-05-04 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV		 unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 0 hpi, Expt. 1 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
17 GSM108049 Expression of CfMNPV select ORFs, 3 hpi, Expt. 1 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV		 unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 3 hpi, Expt. 1 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
18 GSM108050 Expression of CfMNPV select ORFs, 6 hpi, Expt. 1 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV		 unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 6 hpi, Expt. 1 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
19 GSM108053 Expression of CfMNPV select ORFs, 12 hpi, Expt. 1 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV		 unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 12 hpi, Expt. 1 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
20 GSM108056 Expression of CfMNPV select ORFs, 24hpi, Expt. 1 192 University of Guelph 2006-05-05 [Oligo Array] Yang et. al. Oligoarray of CfMNPV select ORFs (GPL3719) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV		 unclassified source_name:Cy5-labeled viral genomic DNA Cy3-labeled cDNA title:Expression of CfMNPV select ORFs, 24hpi, Expt. 1 description:Oligonucleotide-based two-channel DNA microarray was used for characterization of temporal gene expression profiles of select CfMNPV genes representing all four temporal classes. We adapted the DNA normalization protocol using CfMNPV vgDNA as a reference with microarray chips containing oligonucleotide probes for 23 select CfMNPV ORFs and their complements.
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