Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(2,806)		   Primates
(0)		   Rodents
(344)		   Mammals
(0)		   Vertebrates
(0)		   Invertebrates
(95)		   Plants
(130)		   Bacteria
(477)		   Viruses
(0)		   Phages
(0)		   Unclassified
(0)		   All
(3,929)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(1,242)		   Tiling Array
(0)		   cDNA Array
(25)		   Oligo Array
(1,138)		   Bead Array
(1,298)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(72)		   Other
(0)		   All
(3,929)		  
  brain
(18)		   blood
(229)		   connective
(0)		   reproductive
(17)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(60)		   urinary
(0)		   endo/exo-crine
(173)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(57)		   unclassified
(584)		   all
(1,138)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM755575 Rc30_F20_D03 8,674 VTT Technical Research Centre of Finland 2011-07-06 [Oligo Array] NimbleGen_Trichoderma_reesei_genome_version_1.2_400k_array (GPL13828) RNA Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:T. reesei on lactose fed chemostat with growth rate 0.03 title:Rc30_F20_D03 description:Trichoderma reesei RutC-30 in lactose fed chemostat with growth rate 0.03. It is the first of three biological replicates used in this experiment, each from separate cultures.
2 GSM755576 Rc30_F21_D03 8,674 VTT Technical Research Centre of Finland 2011-07-06 [Oligo Array] NimbleGen_Trichoderma_reesei_genome_version_1.2_400k_array (GPL13828) RNA Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:T. reesei on lactose fed chemostat with growth rate 0.03 title:Rc30_F21_D03 description:Trichoderma reesei RutC-30 in lactose fed chemostat with growth rate 0.03. It is the second of three biological replicates used in this experiment, each from separate cultures.
3 GSM755577 Rc30_F23_D06 8,674 VTT Technical Research Centre of Finland 2011-07-06 [Oligo Array] NimbleGen_Trichoderma_reesei_genome_version_1.2_400k_array (GPL13828) RNA Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:T. reesei on lactose fed chemostat with growth rate 0.06 title:Rc30_F23_D06 description:Trichoderma reesei RutC-30 in lactose fed chemostat with growth rate 0.06. It is the first of three biological replicates used in this experiment, each from separate cultures.
4 GSM755578 Rc30_F25_D03 8,674 VTT Technical Research Centre of Finland 2011-07-06 [Oligo Array] NimbleGen_Trichoderma_reesei_genome_version_1.2_400k_array (GPL13828) RNA Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:T. reesei on lactose fed chemostat with growth rate 0.03 title:Rc30_F25_D03 description:Trichoderma reesei RutC-30 in lactose fed chemostat with growth rate 0.03. It is the third of three biological replicates used in this experiment, each from separate cultures.
5 GSM755579 Rc30_F26_D06 8,674 VTT Technical Research Centre of Finland 2011-07-06 [Oligo Array] NimbleGen_Trichoderma_reesei_genome_version_1.2_400k_array (GPL13828) RNA Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:T. reesei on lactose fed chemostat with growth rate 0.06 title:Rc30_F26_D06 description:Trichoderma reesei RutC-30 in lactose fed chemostat with growth rate 0.06. It is the first of three biological replicates used in this experiment, each from separate cultures.
6 GSM755580 Rc30_F27_D06 8,674 VTT Technical Research Centre of Finland 2011-07-06 [Oligo Array] NimbleGen_Trichoderma_reesei_genome_version_1.2_400k_array (GPL13828) RNA Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:T. reesei on lactose fed chemostat with growth rate 0.06 title:Rc30_F27_D06 description:Trichoderma reesei RutC-30 in lactose fed chemostat with growth rate 0.06. It is the second of three biological replicates used in this experiment, each from separate cultures.
7 GSM755581 Rc30_F30_HD 8,674 VTT Technical Research Centre of Finland 2011-07-06 [Oligo Array] NimbleGen_Trichoderma_reesei_genome_version_1.2_400k_array (GPL13828) RNA Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:T. reesei on lactose fed chemostat with growth rate 0.03 and high cell density title:Rc30_F30_HD description:Trichoderma reesei RutC-30 in lactose fed chemostat with growth rate 0.03 with high cell density. It is the first of three biological replicates used in this experiment, each from separate cultures.
8 GSM755582 Rc30_F31_HD 8,674 VTT Technical Research Centre of Finland 2011-07-06 [Oligo Array] NimbleGen_Trichoderma_reesei_genome_version_1.2_400k_array (GPL13828) RNA Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:T. reesei on lactose fed chemostat with growth rate 0.03 and high cell density title:Rc30_F31_HD description:Trichoderma reesei RutC-30 in lactose fed chemostat with growth rate 0.03 with high cell density. It is the second of three biological replicates used in this experiment, each from separate cultures.
9 GSM755583 Rc30_F33_HD 8,674 VTT Technical Research Centre of Finland 2011-07-06 [Oligo Array] NimbleGen_Trichoderma_reesei_genome_version_1.2_400k_array (GPL13828) RNA Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:T. reesei on lactose fed chemostat with growth rate 0.03 and high cell density title:Rc30_F33_HD description:Trichoderma reesei RutC-30 in lactose fed chemostat with growth rate 0.03 with high cell density. It is the third of three biological replicates used in this experiment, each from separate cultures.
10 GSM707155 Sstipitis_GA1 5,841 VTT Technical Research Centre of Finland 2011-04-12 [Oligo Array] Scheffersomyces_stipitis_CBS 6054_385k_array (GPL13403) RNA Scheffersomyces stipitis CBS 6054
Scheffersomyces stipitis CBS 6054		 unclassified source_name:Scheffersomyces stipitis CBS 6054 on glucose title:Sstipitis_GA1 description:Scheffersomyces stipitis CBS 6054 on glucose. It is the first of three wild-type biological replicates used in this experiment, each from separate cultures.
11 GSM707156 Sstipitis_GA2 5,841 VTT Technical Research Centre of Finland 2011-04-12 [Oligo Array] Scheffersomyces_stipitis_CBS 6054_385k_array (GPL13403) RNA Scheffersomyces stipitis CBS 6054
Scheffersomyces stipitis CBS 6054		 unclassified source_name:Scheffersomyces stipitis CBS 6054 on glucose title:Sstipitis_GA2 description:Scheffersomyces stipitis CBS 6054 on glucose. It is the second of three wild-type biological replicates used in this experiment, each from separate cultures.
12 GSM707157 Sstipitis_GA3 5,841 VTT Technical Research Centre of Finland 2011-04-12 [Oligo Array] Scheffersomyces_stipitis_CBS 6054_385k_array (GPL13403) RNA Scheffersomyces stipitis CBS 6054
Scheffersomyces stipitis CBS 6054		 unclassified source_name:Scheffersomyces stipitis CBS 6054 on glucose title:Sstipitis_GA3 description:Scheffersomyces stipitis CBS 6054 on glucose. It is the third of three wild-type biological replicates used in this experiment, each from separate cultures.
13 GSM707158 Sstipitis_RA1 5,841 VTT Technical Research Centre of Finland 2011-04-12 [Oligo Array] Scheffersomyces_stipitis_CBS 6054_385k_array (GPL13403) RNA Scheffersomyces stipitis CBS 6054
Scheffersomyces stipitis CBS 6054		 unclassified source_name:Scheffersomyces stipitis CBS 6054 on rhamnose title:Sstipitis_RA1 description:Scheffersomyces stipitis CBS 6054 on rhamnose. It is the first of three wild-type biological replicates used in this experiment, each from separate cultures.
14 GSM707159 Sstipitis_RA2 5,841 VTT Technical Research Centre of Finland 2011-04-12 [Oligo Array] Scheffersomyces_stipitis_CBS 6054_385k_array (GPL13403) RNA Scheffersomyces stipitis CBS 6054
Scheffersomyces stipitis CBS 6054		 unclassified source_name:Scheffersomyces stipitis CBS 6054 on rhamnose title:Sstipitis_RA2 description:Scheffersomyces stipitis CBS 6054 on rhamnose. It is the second of three wild-type biological replicates used in this experiment, each from separate cultures.
15 GSM707160 Sstipitis_RA3 5,841 VTT Technical Research Centre of Finland 2011-04-12 [Oligo Array] Scheffersomyces_stipitis_CBS 6054_385k_array (GPL13403) RNA Scheffersomyces stipitis CBS 6054
Scheffersomyces stipitis CBS 6054		 unclassified source_name:Scheffersomyces stipitis CBS 6054 on rhamnose title:Sstipitis_RA3 description:Scheffersomyces stipitis CBS 6054 on rhamnose. It is the third of three wild-type biological replicates used in this experiment, each from separate cultures.
16 GSM489053 T. reesei NG14 replicate 1 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:NG14 QM6a title:T. reesei NG14 replicate 1 description:aCGH NG14.1/QM6a.1
17 GSM489054 T. reesei NG14 replicate 2 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:NG14 QM6a title:T. reesei NG14 replicate 2 description:aCGH NG14.2/QM6a.2
18 GSM489055 T. reesei NG14 replicate 3 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:NG14 QM6a title:T. reesei NG14 replicate 3 description:aCGH NG14.3/QM6a.3
19 GSM489056 T. reesei QM6a replicate 1 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:QM6a title:T. reesei QM6a replicate 1 description:aCGH QM6a.1/QM6a.1 self-hybridization
20 GSM489057 T. reesei QM6a replicate 2 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:QM6a title:T. reesei QM6a replicate 2 description:aCGH QM6a.2/QM6a.2 self-hybridization
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