Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 349596 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57
RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(13,212)
  Primates
(64)
  Rodents
(3,987)
  Mammals
(366)
  Vertebrates
(470)
  Invertebrates
(657)
  Plants
(2,050)
  Bacteria
(1,192)
  Viruses
(80)
  Phages
(0)
  Unclassified
(55)
  All
(22,133)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(10,791)
  Tiling Array
(0)
  cDNA Array
(2,439)
  Oligo Array
(6,663)
  Bead Array
(1,060)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(22,133)
 
  brain
(0)
  blood
(1,157)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(1,977)
  all
(6,663)
 
1   |   2   |   3   |   4   |   5      »      [334]
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM318772 04-018 gDNA, experiment ID 36320 372,352 Yale University School of Medicine 2008-09-08 [Oligo Array] YALE/NIMBLEGEN_HUMAN-CHR22_372K_v1.0 (GPL3448) genomic Homo sapiens
Homo sapiens
unclassified source_name:Genomic DNA for sample 04-018 Genomic DNA from 7 normal male individuals (Promega) title:04-018 gDNA, experiment ID 36320 description:HR-CGH was performed in order to demonstrate the detectability of the breakpoints and size of large aberrations (Copy Number Variations). This particular array was used as the control as the native DNA pair for judging the possible locus-by-locus bias and distortion (if any) existed with the products resulted from the process of whole genome amplification with an input of the same original gDNA.
2 GSM319192 05-050 gDNA, experiment ID 42762 372,352 Yale University School of Medicine 2008-09-09 [Oligo Array] YALE/NIMBLEGEN_HUMAN-CHR22_372K_v1.0 (GPL3448) genomic Homo sapiens
Homo sapiens
unclassified source_name:Genomic DNA for sample 05-050 Genomic DNA from 7 normal male individuals (Promega) title:05-050 gDNA, experiment ID 42762 description:HR-CGH was performed in order to demonstrate the detectability of the breakpoints and size of large aberrations (Copy Number Variations). This particular array was used as the control as the native DNA pair for judging the possible locus-by-locus bias and distortion (if any) existed with the products resulted from the process of whole genome amplification with an input of the same original gDNA.
3 GSM319193 04-018 vs. 04-018 gDNA (self), experiment ID 47750 372,352 Yale University School of Medicine 2008-09-09 [Oligo Array] YALE/NIMBLEGEN_HUMAN-CHR22_372K_v1.0 (GPL3448) genomic Homo sapiens
Homo sapiens
unclassified source_name:Genomic DNA for sample 04-018 title:04-018 vs. 04-018 gDNA (self), experiment ID 47750 description:HR-CGH was performed in order to demonstrate the detectability of the breakpoints and size of large aberrations (Copy Number Variations). This particular array was accomplished to show the ratio of a DNA sample against itself on array, which was to demonstrate the variability/noise of the array hybridization itself. Theoretically the ratio should be 1 (or log2 ratio = 0).
4 GSM319194 05-050 gDNA, 40C-Wpa, 5ng, experiment ID 94902 372,352 Yale University School of Medicine 2008-09-09 [Oligo Array] YALE/NIMBLEGEN_HUMAN-CHR22_372K_v1.0 (GPL3448) genomic Homo sapiens
Homo sapiens
unclassified source_name:5 ng of sample 05-050 genomic DNA, amplified using 40C-Wpa 5 ng genomic DNA from 7 normal male individuals (Promega), amplified using 40C-Wpa title:05-050 gDNA, 40C-Wpa, 5ng, experiment ID 94902 description:HR-CGH was performed in order to demonstrate the detectability of the breakpoints and size of known large aberrations (Copy Number Variations). This particular array was applied for judging the possible locus-by-locus bias and distortion (if any) existed with the products resulted from the process of whole genome amplification (40C-Wpa) with an input of the original gDNA.
5 GSM319195 04-018 gDNA, 40C-Wpa, 5ng, experiment ID 98690 372,352 Yale University School of Medicine 2008-09-09 [Oligo Array] YALE/NIMBLEGEN_HUMAN-CHR22_372K_v1.0 (GPL3448) genomic Homo sapiens
Homo sapiens
unclassified source_name:5 ng of sample 04-018 genomic DNA, amplified using 40C-Wpa 5 ng genomic DNA from 7 normal male individuals (Promega), amplified using 40C-Wpa title:04-018 gDNA, 40C-Wpa, 5ng, experiment ID 98690 description:HR-CGH was performed in order to demonstrate the detectability of the breakpoints and size of known large aberrations (Copy Number Variations). This particular array was applied for judging the possible locus-by-locus bias and distortion (if any) existed with the products resulted from the process of whole genome amplification (40C-Wpa) with an input of the original gDNA.
6 GSM319197 05-050 gDNA, Wpa, 5ng, experiment ID 141539 372,352 Yale University School of Medicine 2008-09-09 [Oligo Array] YALE/NIMBLEGEN_HUMAN-CHR22_372K_v1.0 (GPL3448) genomic Homo sapiens
Homo sapiens
unclassified source_name:5 ng of sample 05-050 genomic DNA, amplified using Wpa 5 ng genomic DNA from 7 normal male individuals (Promega), amplified using Wpa title:05-050 gDNA, Wpa, 5ng, experiment ID 141539 description:HR-CGH was performed in order to demonstrate the detectability of the breakpoints and size of known large aberrations (Copy Number Variations). This particular array was applied for judging the possible locus-by-locus bias and distortion (if any) existed with the products resulted from the process of whole genome amplification (Wpa) with an input of the original gDNA.
7 GSM319198 04-018 gDNA, Wpa, 5ng, experiment ID 141542 372,352 Yale University School of Medicine 2008-09-09 [Oligo Array] YALE/NIMBLEGEN_HUMAN-CHR22_372K_v1.0 (GPL3448) genomic Homo sapiens
Homo sapiens
unclassified source_name:5 ng of sample 04-018 genomic DNA, amplified using Wpa 5 ng genomic DNA from 7 normal male individuals (Promega), amplified using Wpa title:04-018 gDNA, Wpa, 5ng, experiment ID 141542 description:HR-CGH was performed in order to demonstrate the detectability of the breakpoints and size of known large aberrations (Copy Number Variations). This particular array was applied for judging the possible locus-by-locus bias and distortion (if any) existed with the products resulted from the process of whole genome amplification (Wpa) with an input of the original gDNA.
8 GSM319199 04-018 gDNA, Wpa, 0.1ng, experiment ID 141565 372,352 Yale University School of Medicine 2008-09-09 [Oligo Array] YALE/NIMBLEGEN_HUMAN-CHR22_372K_v1.0 (GPL3448) genomic Homo sapiens
Homo sapiens
unclassified source_name:0.1 ng of sample 04-018 genomic DNA, amplified using Wpa 0.1 ng genomic DNA from 7 normal male individuals (Promega), amplified using Wpa title:04-018 gDNA, Wpa, 0.1ng, experiment ID 141565 description:HR-CGH was performed in order to demonstrate the detectability of the breakpoints and size of known large aberrations (Copy Number Variations). This particular array was applied for judging the possible locus-by-locus bias and distortion (if any) existed with the products resulted from the process of whole genome amplification (Wpa) with an input of the original gDNA.
9 GSM319200 04-018 gDNA, Wpa, 0.5ng, experiment ID 145381 372,352 Yale University School of Medicine 2008-09-09 [Oligo Array] YALE/NIMBLEGEN_HUMAN-CHR22_372K_v1.0 (GPL3448) genomic Homo sapiens
Homo sapiens
unclassified source_name:0.5 ng of sample 04-018 genomic DNA, amplified using Wpa 0.5 ng genomic DNA from 7 normal male individuals (Promega), amplified using Wpa title:04-018 gDNA, Wpa, 0.5ng, experiment ID 145381 description:HR-CGH was performed in order to demonstrate the detectability of the breakpoints and size of known large aberrations (Copy Number Variations). This particular array was applied for judging the possible locus-by-locus bias and distortion (if any) existed with the products resulted from the process of whole genome amplification (Wpa) with an input of the original gDNA.
10 GSM306250 Newborn normal melanocytes NBMEL_rep1 (RNA) 36,846 Yale University 2008-07-18 [Oligo Array] HG17_Human_60mer_1in2 (GPL6602) RNA Homo sapiens
Homo sapiens
skin Newborn normal melanocytes
11 GSM306252 Newborn normal melanocytes NBMEL_rep2 (RNA) 36,846 Yale University 2008-07-18 [Oligo Array] HG17_Human_60mer_1in2 (GPL6602) RNA Homo sapiens
Homo sapiens
skin Newborn normal melanocytes
12 GSM305872 NSCB_CGH_390K_H9.TSF_3618002.1 385,815 WiCell 2008-07-16 [Oligo Array] Nimblegen WiCell HG18 WG CGH array (GPL7057) genomic Homo sapiens
Homo sapiens
unclassified source_name:SOM01RYJ SOM01RYN title:NSCB_CGH_390K_H9.TSF_3618002.1 description:This CGH experiment is designed to detect deletion, insertation, amplication, etc. in the sample relative to the reference.
13 GSM325343 NSCB_CGH_390K_16236502 385,815 WiCell 2008-09-30 [Oligo Array] WiCell HG18 WG CGH 385K v2 (GPL7717) genomic Homo sapiens
Homo sapiens
unclassified source_name:SOM02V45 Human Reference Genomic DNA title:NSCB_CGH_390K_16236502 description:This CGH experiment is designed to detect deletion, insertation, amplication, etc. in the sample relative to the reference.
14 GSM325344 NSCB_CGH_390K_16236602 385,815 WiCell 2008-09-30 [Oligo Array] WiCell HG18 WG CGH 385K v2 (GPL7717) genomic Homo sapiens
Homo sapiens
unclassified source_name:SOM02V46 Human Reference Genomic DNA title:NSCB_CGH_390K_16236602 description:This CGH experiment is designed to detect deletion, insertation, amplication, etc. in the sample relative to the reference.
15 GSM325345 NSCB_CGH_390K_16246002 385,815 WiCell 2008-09-30 [Oligo Array] WiCell HG18 WG CGH 385K v2 (GPL7717) genomic Homo sapiens
Homo sapiens
unclassified source_name:SOM02V47 Human Reference Genomic DNA title:NSCB_CGH_390K_16246002 description:This CGH experiment is designed to detect deletion, insertation, amplication, etc. in the sample relative to the reference.
16 GSM325346 NSCB_CGH_390K_16250102 385,815 WiCell 2008-09-30 [Oligo Array] WiCell HG18 WG CGH 385K v2 (GPL7717) genomic Homo sapiens
Homo sapiens
unclassified source_name:SOM02V48 Human Reference Genomic DNA title:NSCB_CGH_390K_16250102 description:This CGH experiment is designed to detect deletion, insertation, amplication, etc. in the sample relative to the reference.
17 GSM325347 NSCB_CGH_390K_16250202 385,815 WiCell 2008-09-30 [Oligo Array] WiCell HG18 WG CGH 385K v2 (GPL7717) genomic Homo sapiens
Homo sapiens
unclassified source_name:SOM02V49 Human Reference Genomic DNA title:NSCB_CGH_390K_16250202 description:This CGH experiment is designed to detect deletion, insertation, amplication, etc. in the sample relative to the reference.
18 GSM325348 NSCB_CGH_390K_16250302 385,815 WiCell 2008-09-30 [Oligo Array] WiCell HG18 WG CGH 385K v2 (GPL7717) genomic Homo sapiens
Homo sapiens
unclassified source_name:SOM02V4E Human Reference Genomic DNA title:NSCB_CGH_390K_16250302 description:This CGH experiment is designed to detect deletion, insertation, amplication, etc. in the sample relative to the reference.
19 GSM325349 NSCB_CGH_390K_16250402 385,815 WiCell 2008-09-30 [Oligo Array] WiCell HG18 WG CGH 385K v2 (GPL7717) genomic Homo sapiens
Homo sapiens
unclassified source_name:SOM02V4J Human Reference Genomic DNA title:NSCB_CGH_390K_16250402 description:This CGH experiment is designed to detect deletion, insertation, amplication, etc. in the sample relative to the reference.
20 GSM325350 NSCB_CGH_390K_16250502 385,815 WiCell 2008-09-30 [Oligo Array] WiCell HG18 WG CGH 385K v2 (GPL7717) genomic Homo sapiens
Homo sapiens
unclassified source_name:SOM02V4G Human Reference Genomic DNA title:NSCB_CGH_390K_16250502 description:This CGH experiment is designed to detect deletion, insertation, amplication, etc. in the sample relative to the reference.
1   |   2   |   3   |   4   |   5      »      [334]