Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(13,224)
  Primates
(64)
  Rodents
(3,987)
  Mammals
(366)
  Vertebrates
(470)
  Invertebrates
(657)
  Plants
(2,050)
  Bacteria
(1,197)
  Viruses
(80)
  Phages
(0)
  Unclassified
(55)
  All
(22,150)
 
  SAGE NlaIII
(19)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(10,803)
  Tiling Array
(785)
  cDNA Array
(2,439)
  Oligo Array
(6,668)
  Bead Array
(1,060)
  Protein Array
(0)
  Antibody
(120)
  RT-PCR
(48)
  HT-Seq
(204)
  Other
(3)
  All
(22,150)
 
  brain
(425)
  blood
(1,157)
  connective
(406)
  reproductive
(372)
  muscular
(341)
  digestive
(404)
  liver
(252)
  lung
(419)
  urinary
(79)
  endo/exo-crine
(272)
  embryo
(105)
  adult aerial structure
(186)
  young aerial structure
(0)
  root
(4)
  meristem/growing tissue
(0)
  flower/sexual organ
(106)
  seed/fruit/grain
(0)
  pooled
(158)
  unclassified
(1,982)
  all
(6,668)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM306250 Newborn normal melanocytes NBMEL_rep1 (RNA) 36,846 Yale University 2008-07-18 [Oligo Array] HG17_Human_60mer_1in2 (GPL6602) RNA Homo sapiens
Homo sapiens
skin Newborn normal melanocytes
2 GSM306252 Newborn normal melanocytes NBMEL_rep2 (RNA) 36,846 Yale University 2008-07-18 [Oligo Array] HG17_Human_60mer_1in2 (GPL6602) RNA Homo sapiens
Homo sapiens
skin Newborn normal melanocytes
3 GSM302945 HeLa cells transfected with miR-124 duplex versus control transfected HeLa, 24 hours 45,015 Whitehead Institute 2008-07-02 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
skin Mock transfected HeLa cells, 24 hours HeLa cells transfected with miR-124 duplex, 24 hours
4 GSM302946 HeLa cells transfected with miR-1 duplex versus control transfected HeLa, 24 hours 45,015 Whitehead Institute 2008-07-02 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
skin Mock transfected HeLa cells, 24 hours HeLa cells transfected with miR-1 duplex, 24 hours
5 GSM302995 HeLa cells transfected with miR-181 duplex versus control transfected HeLa, 24 hours 45,015 Whitehead Institute 2008-07-02 [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) RNA Homo sapiens
Homo sapiens
skin Mock transfected HeLa cells, 24 hours HeLa cells transfected with miR-181 duplex, 24 hours
6 GSM305472 Wild Type Keratinocyte vs CHUK-LoxP Mutant Keratinocyte_rep1 45,018 UT M.D.Andreson Cancer Center 2008-07-14 [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) RNA Mus musculus
Mus musculus
skin Wild Type Keratinocyte CHUK-LoxP Mutant Keratinocyte
7 GSM305473 Wild Type Keratinocyte vs CHUK-LoxP Mutant Keratinocyte_rep2 45,018 UT M.D.Andreson Cancer Center 2008-07-14 [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) RNA Mus musculus
Mus musculus
skin Wild Type Keratinocytes CHUK-LoxP Mutant Keratinocytes
8 GSM303604 C666-1 Nasopharyngeal carcinoma cell line, EBV-positive 39 University of Wisconsin-Madison 2008-07-06 [Oligo Array] Sugden Lab Epstein-Barr virus (EBV) miRNA microarray (GPL7022) RNA Human herpesvirus 4
Human herpesvirus 4
skin C666-1 Nasopharyngeal carcinoma cell line, EBV-positive
9 GSM325298 Skin 41,534 University of Toronto 2008-09-29 [Oligo Array] Agilent custom 44K chicken array (GPL7399) RNA Gallus gallus
Gallus gallus
skin Skin tissue of chicken
10 GSM325325 Calvaria 41,533 University of Toronto 2008-09-29 [Oligo Array] Agilent custom 44K tetraodon array (GPL7401) RNA Tetraodon nigroviridis
Tetraodon nigroviridis
bone Calvaria tissue of pufferfish
11 GSM325327 Fin 41,533 University of Toronto 2008-09-29 [Oligo Array] Agilent custom 44K tetraodon array (GPL7401) RNA Tetraodon nigroviridis
Tetraodon nigroviridis
skin Fin tissue of pufferfish
12 GSM325336 Skin 41,533 University of Toronto 2008-09-29 [Oligo Array] Agilent custom 44K tetraodon array (GPL7401) RNA Tetraodon nigroviridis
Tetraodon nigroviridis
skin Skin tissue of pufferfish
13 GSM325304 Cartilage 41,523 University of Toronto 2008-09-29 [Oligo Array] Agilent custom 44K frog array (GPL7400) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
bone Cartilage tissue of frog
14 GSM325307 Fat body 41,523 University of Toronto 2008-09-29 [Oligo Array] Agilent custom 44K frog array (GPL7400) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
adipos Fat body tissue of frog
15 GSM325318 Skin 41,523 University of Toronto 2008-09-29 [Oligo Array] Agilent custom 44K frog array (GPL7400) RNA Xenopus (Silurana) tropicalis
Xenopus tropicalis
skin Skin tissue of frog
16 GSM315243 Upper part of hair follicle_2 23,232 University of British Columbia 2008-08-22 [Oligo Array] PRHU05-S1-0006 (PC Human Operon v2 21k) (GPL3877) RNA Homo sapiens
Homo sapiens
skin upper part of hair follicle universal human reference RNA (Stratagene, Cedar Creek, TX)
17 GSM315245 Upper part of hair follicle_4 23,232 University of British Columbia 2008-08-22 [Oligo Array] PRHU05-S1-0006 (PC Human Operon v2 21k) (GPL3877) RNA Homo sapiens
Homo sapiens
skin upper part of hair follicle universal human reference RNA (Stratagene, Cedar Creek, TX)
18 GSM315246 Upper part of hair follicle_5 23,232 University of British Columbia 2008-08-22 [Oligo Array] PRHU05-S1-0006 (PC Human Operon v2 21k) (GPL3877) RNA Homo sapiens
Homo sapiens
skin upper part of hair follicle universal human reference RNA (Stratagene, Cedar Creek, TX)
19 GSM315247 Upper part of hair follicle_3 23,232 University of British Columbia 2008-08-22 [Oligo Array] PRHU05-S1-0006 (PC Human Operon v2 21k) (GPL3877) RNA Homo sapiens
Homo sapiens
skin upper part of hair follicle universal human reference RNA (Stratagene, Cedar Creek, TX)
20 GSM315248 Upper part of hair follicle_6 23,232 University of British Columbia 2008-08-22 [Oligo Array] PRHU05-S1-0006 (PC Human Operon v2 21k) (GPL3877) RNA Homo sapiens
Homo sapiens
skin upper part of hair follicle universal human reference RNA (Stratagene, Cedar Creek, TX)
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