Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(10,583)		   blood
(30,578)		   connective
(12,519)		   reproductive
(8,009)		   muscular
(4,910)		   digestive
(7,795)		   liver
(23,572)		   lung
(6,574)		   urinary
(3,898)		   endo/exo-crine
(12,667)		   embryo
(3,693)		   adult aerial structure
(4,120)		   young aerial structure
(1,049)		   root
(1,088)		   meristem/growing tissue
(442)		   flower/sexual organ
(950)		   seed/fruit/grain
(824)		   pooled
(15,623)		   unclassified
(90,690)		   all
(239,584)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM254083 Medicago_Seed 380,344 Yale University 2008-01-02 [Oligo Array] Yale University MCDB Medicago truncatula NimbleGen 390K Oligo Array (GPL6335) RNA Medicago truncatula
Medicago truncatula		 other seed/fruit/grain Medicago seed
2 GSM254089 Soybean_Seed 366,572 Yale University 2008-01-02 [Oligo Array] Yale University MCDB Glycine max NimbleGen 390K Oligo Array (GPL6337) RNA Glycine max
Glycine max		 other seed/fruit/grain Soybean seed
3 GSM329516 Embryo - Epiblast - 12hr post imbibition Replicate 1 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (red). Amplified RNA from rice Embryo - Epiblast - 12hr post imbibition (green)
4 GSM329517 Embryo - Epiblast - 12hr post imbibition Replicate 2 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (red). Amplified RNA from rice Embryo - Epiblast - 12hr post imbibition (green)
5 GSM329518 Embryo - Epiblast - 12hr post imbibition Replicate 3 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (green). Amplified RNA from rice Embryo - Epiblast - 12hr post imbibition (red)
6 GSM329519 Embryo - Epiblast - 12hr post imbibition Replicate 4 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (green). Amplified RNA from rice Embryo - Epiblast - 12hr post imbibition (red)
7 GSM329520 Embryo - Plumule - 12hr post imbibition Replicate 1 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (red). Amplified RNA from rice Embryo - Plumule - 12hr post imbibition (green)
8 GSM329521 Embryo - Plumule - 12hr post imbibition Replicate 2 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (red). Amplified RNA from rice Embryo - Plumule - 12hr post imbibition (green)
9 GSM329522 Embryo - Plumule - 12hr post imbibition Replicate 3 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (green). Amplified RNA from rice Embryo - Plumule - 12hr post imbibition (red)
10 GSM329523 Embryo - Plumule - 12hr post imbibition Replicate 4 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (green). Amplified RNA from rice Embryo - Plumule - 12hr post imbibition (red)
11 GSM329524 Embryo - Radicle - 12hr post imbibition Replicate 1 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (red). Amplified RNA from rice Embryo - Radicle - 12hr post imbibition (green)
12 GSM329525 Embryo - Radicle - 12hr post imbibition Replicate 2 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (red). Amplified RNA from rice Embryo - Radicle - 12hr post imbibition (green)
13 GSM329526 Embryo - Radicle - 12hr post imbibition Replicate 3 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (green). Amplified RNA from rice Embryo - Radicle - 12hr post imbibition (red)
14 GSM329527 Embryo - Radicle - 12hr post imbibition Replicate 4 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (green). Amplified RNA from rice Embryo - Radicle - 12hr post imbibition (red)
15 GSM329528 Embryo - Scutellum - 12hr post imbibition Replicate 1 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (red). Amplified RNA from rice Embryo - Scutellum - 12hr post imbibition (green)
16 GSM329529 Embryo - Scutellum - 12hr post imbibition Replicate 2 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (red). Amplified RNA from rice Embryo - Scutellum - 12hr post imbibition (green)
17 GSM329530 Embryo - Scutellum - 12hr post imbibition Replicate 3 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (green). Amplified RNA from rice Embryo - Scutellum - 12hr post imbibition (red)
18 GSM329531 Embryo - Scutellum - 12hr post imbibition Replicate 4 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (green). Amplified RNA from rice Embryo - Scutellum - 12hr post imbibition (red)
19 GSM329536 Embryo - Epiblast - 24hr post imbibition Replicate 1 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (red). Amplified RNA from rice Embryo - Epiblast - 24hr post imbibition (green)
20 GSM329537 Embryo - Epiblast - 24hr post imbibition Replicate 2 59,267 Yale University 2008-10-10 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 embryo Amplified RNA from rice suspension cultured cells (red). Amplified RNA from rice Embryo - Epiblast - 24hr post imbibition (green)
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