Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(6,763)		   Primates
(4)		   Rodents
(3,704)		   Mammals
(141)		   Vertebrates
(405)		   Invertebrates
(835)		   Plants
(1,401)		   Bacteria
(717)		   Viruses
(12)		   Phages
(0)		   Unclassified
(14)		   All
(13,996)		  
  SAGE NlaIII
(219)		   SAGE RsaI
(0)		   SAGE Sau3A
(1)		   MPSS
(5)		   GeneChip
(6,764)		   Tiling Array
(226)		   cDNA Array
(3,605)		   Oligo Array
(3,107)		   Bead Array
(64)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(5)		   All
(13,996)		  
  brain
(303)		   blood
(163)		   connective
(71)		   reproductive
(123)		   muscular
(164)		   digestive
(14)		   liver
(185)		   lung
(65)		   urinary
(8)		   endo/exo-crine
(288)		   embryo
(56)		   adult aerial structure
(11)		   young aerial structure
(2)		   root
(0)		   meristem/growing tissue
(27)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(80)		   unclassified
(1,547)		   all
(3,107)		  
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM112815 N_100G_6hr 22,575 National Institute of Agrobiological Sciences 2006-06-06 [Oligo Array] Agilent-011839 Arabidopsis 2 Oligo Microarray G4136A (Feature Number version) (GPL888) RNA Arabidopsis thaliana
Arabidopsis thaliana		 young aerial structure Arabidopsis ecotype Nossen wild-type plants were grown on solidified MS medium. Total RNAs were prepared from irradiated / non-irradiated seedlings using an RNeasy Mini Kit (Qiagen, Hilden, Germany). 400 ng of each RNA sample was reverse transcribed, labeled with Cy3, Cy5, and purified with an RNeasy Mini Kit (Qiagen). One microgram each of Cy3- and Cy5-labeled cRNA was added to 500 ul of the hybridization buffer and the mixtures were applied to microarrays under cover slips (Arabidopsis 2 Oligo Microarray, Agilent).
2 GSM112816 N_100G_12hr 22,575 National Institute of Agrobiological Sciences 2006-06-06 [Oligo Array] Agilent-011839 Arabidopsis 2 Oligo Microarray G4136A (Feature Number version) (GPL888) RNA Arabidopsis thaliana
Arabidopsis thaliana		 young aerial structure Arabidopsis ecotype Nossen wild-type plants were grown on solidified MS medium. Total RNAs were prepared from irradiated / non-irradiated seedlings using an RNeasy Mini Kit (Qiagen, Hilden, Germany). 400 ng of each RNA sample was reverse transcribed, labeled with Cy3, Cy5, and purified with an RNeasy Mini Kit (Qiagen). One microgram each of Cy3- and Cy5-labeled cRNA was added to 500 ul of the hybridization buffer and the mixtures were applied to microarrays under cover slips (Arabidopsis 2 Oligo Microarray, Agilent).
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