Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(77)
  Primates
(0)
  Rodents
(38)
  Mammals
(17)
  Vertebrates
(14)
  Invertebrates
(22)
  Plants
(51)
  Bacteria
(73)
  Viruses
(6)
  Phages
(1)
  Unclassified
(22)
  All
(324)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(9)
  Tiling Array
(5)
  cDNA Array
(58)
  Oligo Array
(233)
  Bead Array
(1)
  Protein Array
(0)
  Antibody
(3)
  RT-PCR
(11)
  HT-Seq
(2)
  Other
(1)
  All
(324)
 
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL15466 TaqMan® Rodent MicroRNA Array v3.0 A/B 768 Renji Hospital, JiaoTong University School of Medicine 2012-04-19 Applied Biosystems Mus musculus
Mus musculus
RT-PCR RT-PCR, TaqMan® Rodent MicroRNA Array v3.0 A/B, PCR assay
2 GPL15467 TaqMan® Human MicroRNA Array v3.0 A/B 768 Renji Hospital, JiaoTong University School of Medicine 2012-04-19 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan® Human MicroRNA Array v3.0 A/B, PCR assay
3 GPL15695 Exiqon microRNA Ready-to-Use PCR, Human panel I+II, V2.M 768 Cancer Hospital, Fudan University 2012-06-14 Exiqon Homo sapiens
Homo sapiens
RT-PCR RT-PCR, Exiqon microRNA Ready-to-Use PCR, Human panel I+II, V2.M, miRCURY LNAâ„¢ Universal RT microRNA PCR, 4x Human panel I and 4x Human panel II in 384well PCR plates. One reaction each of 742 human microRNAs and 6 reference genes. For use with ABI 7900HT and other instruments.
4 GPL17797 Applied Biosystems Human MicroRNA Cards (A+B Cards) 768 Nanjing University 2013-10-21 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, Applied Biosystems Human MicroRNA Cards (A+B Cards), PCR assay Two array card-set ('Array Card Human A v2.1' and 'Array Card Human B v3.0' )
5 GPL17734 Rodent A v2.0 765 Nanjing University 2013-09-16 ABI Mus musculus
Mus musculus
RT-PCR RT-PCR, Rodent A v2.0, PCR assay
6 GPL15468 TaqMan® Human MicroRNA Array v2.0 A/B 671 Renji Hospital, JiaoTong University School of Medicine 2012-04-19 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan® Human MicroRNA Array v2.0 A/B, PCR assay
7 GPL10922 Tongji University School of Medicine TaqMan MicroRNA Array v2.0 A 381 Key Laboratory of Arrhythmias, Ministry of Education, China (Tongji University School of Medicine) 2010-09-15 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, Tongji University School of Medicine TaqMan MicroRNA Array v2.0 A,
8 GPL16683 SYBR green based Human miRNA PCR assay panel 347 China Medical University 2013-02-14 n/a Homo sapiens
Homo sapiens
RT-PCR RT-PCR, SYBR green based Human miRNA PCR assay panel, This is a SYBR green based qPCR method to achieve higher accuracy and sensitivity of small RNA detection. E. Coli polyA polymerase was employed to add multiple adenines at the end of every RNA molecules in the total RNA pool that lacks of a polyA tail. With retro-transcriptase and oligodT annealing, a universal tag was introduced to the 3’ end of cDNAs. Using this tag, quantitative PCR was performed with microRNA-specific forward primer and reverse universal primer mix.
9 GPL10923 Tongji University School of Medicine TaqMan MicroRNA Array v2.0 B 294 Key Laboratory of Arrhythmias, Ministry of Education, China (Tongji University School of Medicine) 2010-09-15 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, Tongji University School of Medicine TaqMan MicroRNA Array v2.0 B,
10 GPL5152 RT^2 Profiler PCR Array Mouse Angiogenesis (PAMM-024A) 90 Lab of Bioeffects of Nanosized Materials, Institute of High Energy Physics 2007-05-09 Mus musculus
Mus musculus
RT-PCR RT-PCR, RT^2 Profiler PCR Array Mouse Angiogenesis (PAMM-024A), We synthesize a novel nanoparticle with functional surface coating, which inhibits tumor growth without detectable cytotoxicities by suppress angiogenesis in the tumor mass. Quantitative counting RTPCR-array analysis was used to evalute the pro-angiogenic factor(s) on mRNA level.
11 GPL5153 PCR Array Mouse Angiogenesis(PA-012) 89 Lab of Bioeffects of Nanosized Materials, Institute of High Energy Physics 2007-05-10 Mus musculus
Mus musculus
RT-PCR RT-PCR, PCR Array Mouse Angiogenesis(PA-012), We synthesize a novel nanoparticle with functional surface coating, which inhibits tumor growth without detectable cytotoxicities by suppress angiogenesis in the tumor mass. Quantitative counting RTPCR-array analysis was used to evalute the pro-angiogenic factor(s) on mRNA level.