Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(16,798)
  Primates
(133)
  Rodents
(5,546)
  Mammals
(406)
  Vertebrates
(547)
  Invertebrates
(1,922)
  Plants
(2,558)
  Bacteria
(1,515)
  Viruses
(10)
  Phages
(0)
  Unclassified
(130)
  All
(29,629)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(27)
  GeneChip
(12,171)
  Tiling Array
(562)
  cDNA Array
(1,936)
  Oligo Array
(8,289)
  Bead Array
(5,723)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(22)
  HT-Seq
(742)
  Other
(157)
  All
(29,629)
 
  brain
(3)
  blood
(18)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(1)
  unclassified
(0)
  all
(22)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM436103 frontal_cortex_control 384 University of California San Diego 2009-08-03 [RT-PCR] Applied Biosystems Human Taqman MicroRNA Array v2.0 (GPL8979) RNA Homo sapiens
Homo sapiens
cerebrum brain_frontal_frozen_control
2 GSM436104 frontal_cortex_HIV 384 University of California San Diego 2009-08-03 [RT-PCR] Applied Biosystems Human Taqman MicroRNA Array v2.0 (GPL8979) RNA Homo sapiens
Homo sapiens
cerebrum brain_frontal_frozen_HIV
3 GSM436105 frontal_cortex_HIVMDD 384 University of California San Diego 2009-08-03 [RT-PCR] Applied Biosystems Human Taqman MicroRNA Array v2.0 (GPL8979) RNA Homo sapiens
Homo sapiens
cerebrum brain_frontal_frozen_HIVMDD
4 GSM434746 Akt1+/+ 364 University of Crete 2009-07-30 [RT-PCR] miRNA profile from LPS-treated Akt1-/- macrophages (GPL8952) RNA Mus musculus
Mus musculus
peripheral blood macrophages -primary
5 GSM434747 Akt1-/- 364 University of Crete 2009-07-30 [RT-PCR] miRNA profile from LPS-treated Akt1-/- macrophages (GPL8952) RNA Mus musculus
Mus musculus
peripheral blood macrophages -primary
6 GSM434748 Akt1+/+ LPS 364 University of Crete 2009-07-30 [RT-PCR] miRNA profile from LPS-treated Akt1-/- macrophages (GPL8952) RNA Mus musculus
Mus musculus
peripheral blood macrophages -primary
7 GSM434749 Akt1-/- LPS 364 University of Crete 2009-07-30 [RT-PCR] miRNA profile from LPS-treated Akt1-/- macrophages (GPL8952) RNA Mus musculus
Mus musculus
peripheral blood macrophages -primary
8 GSM438131 CD34_HPCs 157 University of Modena and Reggio Emilia 2009-08-11 [RT-PCR] TaqMan MicroRNA Assays Human Panel Early Access Kit (Applied Biosystems) (GPL9019) RNA Homo sapiens
Homo sapiens
pooled Stem/progenitor hematopoietic cells CD34+ from cord blood (CB)
9 GSM438132 ERYTROBLASTS 157 University of Modena and Reggio Emilia 2009-08-11 [RT-PCR] TaqMan MicroRNA Assays Human Panel Early Access Kit (Applied Biosystems) (GPL9019) RNA Homo sapiens
Homo sapiens
peripheral blood In vitro differentiated normal human erythroblasts
10 GSM438133 MEGAKARYOBLASTS 157 University of Modena and Reggio Emilia 2009-08-11 [RT-PCR] TaqMan MicroRNA Assays Human Panel Early Access Kit (Applied Biosystems) (GPL9019) RNA Homo sapiens
Homo sapiens
peripheral blood In vitro differentiated normal human megakaryoblasts
11 GSM438134 MYELOBLASTS 157 University of Modena and Reggio Emilia 2009-08-11 [RT-PCR] TaqMan MicroRNA Assays Human Panel Early Access Kit (Applied Biosystems) (GPL9019) RNA Homo sapiens
Homo sapiens
bone marrow In vitro differentiated normal human myeloblasts
12 GSM438135 MONOBLASTS 157 University of Modena and Reggio Emilia 2009-08-11 [RT-PCR] TaqMan MicroRNA Assays Human Panel Early Access Kit (Applied Biosystems) (GPL9019) RNA Homo sapiens
Homo sapiens
peripheral blood In vitro differentiated normal human monoblasts
13 GSM434486 PMBC_Case_rep1 89 National Cheng Kung University 2009-07-28 [RT-PCR] Human Tumor Necrosis Factor (TNF) Ligand and Receptor PCR Array cat. #PAHS-063 (GPL8930) RNA Homo sapiens
Homo sapiens
peripheral blood peripheral mononuclear blood cells from PVL case
14 GSM434487 PMBC_Control_rep1 89 National Cheng Kung University 2009-07-28 [RT-PCR] Human Tumor Necrosis Factor (TNF) Ligand and Receptor PCR Array cat. #PAHS-063 (GPL8930) RNA Homo sapiens
Homo sapiens
peripheral blood peripheral mononuclear blood cells from Control
15 GSM434488 PMBC_Control_rep2 89 National Cheng Kung University 2009-07-28 [RT-PCR] Human Tumor Necrosis Factor (TNF) Ligand and Receptor PCR Array cat. #PAHS-063 (GPL8930) RNA Homo sapiens
Homo sapiens
peripheral blood peripheral mononuclear blood cells from Control
16 GSM434489 PMBC_Control_rep3 89 National Cheng Kung University 2009-07-29 [RT-PCR] Human Tumor Necrosis Factor (TNF) Ligand and Receptor PCR Array cat. #PAHS-063 (GPL8930) RNA Homo sapiens
Homo sapiens
peripheral blood peripheral mononuclear blood cells from Control
17 GSM434490 PMBC_Case_rep3 89 National Cheng Kung University 2009-07-29 [RT-PCR] Human Tumor Necrosis Factor (TNF) Ligand and Receptor PCR Array cat. #PAHS-063 (GPL8930) RNA Homo sapiens
Homo sapiens
peripheral blood peripheral mononuclear blood cells from PVL case
18 GSM434491 PMBC_Case_rep4 89 National Cheng Kung University 2009-07-29 [RT-PCR] Human Tumor Necrosis Factor (TNF) Ligand and Receptor PCR Array cat. #PAHS-063 (GPL8930) RNA Homo sapiens
Homo sapiens
peripheral blood peripheral mononuclear blood cells from PVL case
19 GSM434492 PMBC_Case_rep5 89 National Cheng Kung University 2009-07-29 [RT-PCR] Human Tumor Necrosis Factor (TNF) Ligand and Receptor PCR Array cat. #PAHS-063 (GPL8930) RNA Homo sapiens
Homo sapiens
peripheral blood peripheral mononuclear blood cells from PVL case
20 GSM434493 PMBC_Control_rep5 89 National Cheng Kung University 2009-07-29 [RT-PCR] Human Tumor Necrosis Factor (TNF) Ligand and Receptor PCR Array cat. #PAHS-063 (GPL8930) RNA Homo sapiens
Homo sapiens
peripheral blood peripheral mononuclear blood cells from Control
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