Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(1,683)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(439)
  GeneChip
(377,145)
  Tiling Array
(21,846)
  cDNA Array
(103,476)
  Oligo Array
(239,584)
  Bead Array
(106,999)
  Protein Array
(5)
  Antibody
(1,152)
  RT-PCR
(3,959)
  HT-Seq
(35,574)
  Other
(6,909)
  All
(898,944)
 
  brain
(186)
  blood
(983)
  connective
(202)
  reproductive
(92)
  muscular
(148)
  digestive
(268)
  liver
(504)
  lung
(177)
  urinary
(27)
  endo/exo-crine
(299)
  embryo
(31)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(309)
  unclassified
(733)
  all
(3,959)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1000778 naive Treg 96 CRTD 2012-09-10 [RT-PCR] SABiosciences human T cell anergy and tolerance PCR assay panel (GPL16036) RNA Homo sapiens
Homo sapiens
lymphnode MACS enriched and FACS sorted CD4+CD25+CD127lowCD45RA+ Treg from human PBMC
2 GSM1000779 naive Treg + IL-7 96 CRTD 2012-09-10 [RT-PCR] SABiosciences human T cell anergy and tolerance PCR assay panel (GPL16036) RNA Homo sapiens
Homo sapiens
lymphnode MACS enriched and FACS sorted CD4+CD25+CD127lowCD45RA+ Treg from human PBMC
3 GSM1000780 memory Treg 96 CRTD 2012-09-10 [RT-PCR] SABiosciences human T cell anergy and tolerance PCR assay panel (GPL16036) RNA Homo sapiens
Homo sapiens
lymphnode MACS enriched and FACS sorted CD4+CD25+CD127lowCD45RA- Treg from human PBMC
4 GSM1000781 memory Treg + IL-7 96 CRTD 2012-09-10 [RT-PCR] SABiosciences human T cell anergy and tolerance PCR assay panel (GPL16036) RNA Homo sapiens
Homo sapiens
lymphnode MACS enriched and FACS sorted CD4+CD25+CD127lowCD45RA- Treg from human PBMC
5 GSM1016039 Rat liver HW Corn oil 1.5 hours rep 1 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, Corn oil treated, 1.5 hour exposure
6 GSM1016040 Rat liver HW Corn oil 1.5 hours rep 2 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, Corn oil treated, 1.5 hour exposure
7 GSM1016041 Rat liver HW Corn oil 1.5 hours rep 3 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, Corn oil treated, 1.5 hour exposure
8 GSM1016042 Rat liver HW 100 TCDD 1.5 hours rep 1 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 1.5 hour exposure
9 GSM1016043 Rat liver HW 100 TCDD 1.5 hours rep 2 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 1.5 hour exposure
10 GSM1016044 Rat liver HW 100 TCDD 1.5 hours rep 3 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 1.5 hour exposure
11 GSM1016045 Rat liver HW 100 TCDD 3 hours rep 1 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 3 hour exposure
12 GSM1016046 Rat liver HW 100 TCDD 3 hours rep 2 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 3 hour exposure
13 GSM1016047 Rat liver HW 100 TCDD 3 hours rep 3 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 3 hour exposure
14 GSM1016048 Rat liver HW 100 TCDD 3 hours rep 4 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 3 hour exposure
15 GSM1016049 Rat liver HW 100 TCDD 6 hours rep 1 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 6 hour exposure
16 GSM1016050 Rat liver HW 100 TCDD 6 hours rep 2 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 6 hour exposure
17 GSM1016051 Rat liver HW 100 TCDD 6 hours rep 3 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 6 hour exposure
18 GSM1016052 Rat liver HW 100 TCDD 6 hours rep 4 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 6 hour exposure
19 GSM1016053 Rat liver HW 100 TCDD 10 hours rep 1 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 10 hour exposure
20 GSM1016054 Rat liver HW 100 TCDD 10 hours rep 2 110 Ontario Institute of Cancer Research 2012-10-05 [RT-PCR] Applied Biosystems Open Array Custom Assays (rat) (GPL16145) RNA Rattus norvegicus
Rattus norvegicus
liver/hepato liver, Han/Wistar, 100 TCDD, 10 hour exposure
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