Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(16,580)		   Tiling Array
(3,529)		   cDNA Array
(5,792)		   Oligo Array
(11,628)		   Bead Array
(2,848)		   Protein Array
(1)		   Antibody
(37)		   RT-PCR
(223)		   HT-Seq
(4,411)		   Other
(158)		   All
(45,516)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Spore formation of Lentinula edodes (LongSAGE) (GSE25463) [SAGE NlaIII] SAGE:15:NlaIII:Lentinula edodes (GPL11229) The Chinese University of Hong Kong 2010-11-18 Lentinula edodes
Lentinula edodes		 1,052
(526 x 2) 		1 1 by_platform
by_series
2 Dictyostelium discoideum amoeba stage library (GSE12095) [SAGE NlaIII] SAGE:10:NlaIII:Dictyostelium discoideum (GPL7037) Idaho State University 2008-07-11 Dictyostelium discoideum
Dictyostelium discoideum		 3,414
(3,414 x 1) 		1 by_platform
by_series
3 leaf_greenhouse (GSE2811) [SAGE NlaIII] SAGE:22:NlaIII:Musa acuminata (GPL2542) Katholieke Universiteit Leuven 2005-06-14 Musa acuminata
Musa acuminata		 5,292
(5,292 x 1) 		1 by_platform
by_series
4 Application of Serial Analysis of Gene Expression to the study of the gene expression profile of Leishmania infantum chagasi promastigote (GSE29369) [SAGE NlaIII] SAGE:17:NlaIII:Leishmania chagasi (GPL11414) INSTITUTO DE DOENÇAS TROPICAIS NATAN PORTELLA 2011-05-18 Leishmania chagasi
Leishmania chagasi		 8,016
(8,016 x 1) 		1 by_platform
by_series
5 Global transcription analysis of immature avian erythrocytic progenitors (GSE2026) [SAGE NlaIII] SAGE:10:NlaIII:Gallus gallus (GPL1724) Universite' Claude Bernard Lyon I 2004-11-30 Gallus gallus
Gallus gallus		 8,180
(4,090 x 2) 		2 by_platform
by_series
6 Simultaneous gene expression profiling in human macrophages infected with Leishmania major parasites using SAGE (GSE10442) [SAGE NlaIII] SAGE:10:NlaIII:Leishmania major (GPL6471) Institut Pasteur de Tunis 2008-02-07 Leishmania major
Leishmania major		 9,530
(9,530 x 1) 		1 by_platform
by_series
7 SAGE analysis of maize root segments (GSE25761) [SAGE NlaIII] SAGE:10:NlaIII:Zea mays (GPL1244) University of Illinois 2010-12-01 Zea mays
Zea mays		 14,850
(14,850 x 1) 		1 by_platform
by_series
8 Babesia Infected/Control LongSAGE libraries for Boophilus microplus ovary tissue (GSE9880) [SAGE NlaIII] SAGE:17:NlaIII:Rhipicephalus microplus (GPL6274) USDA 2007-12-13 Rhipicephalus microplus
Rhipicephalus microplus		 16,900
(8,450 x 2) 		2 by_platform
by_series
9 LongSAGE during the initiation of ligninolytic enzymes production in Phanerochaete chrysosporium (GSE6649) [SAGE NlaIII] SAGE:17:NlaIII:Phanerochaete chrysosporium (GPL4722) University of Shiga Prefecture 2007-01-04 Phanerochaete chrysosporium
Phanerochaete chrysosporium		 22,048
(11,024 x 2) 		2 by_platform
by_series
10 Comprehensive gene expression analysis of Bruce-4 embryonic stem cells by SAGE (GSE9078) [SAGE NlaIII] SAGE:11:NlaIII:Mus musculus (GPL5885) Miltenyi Biotec GmbH 2007-09-18 Mus musculus
Mus musculus		 23,364
(23,364 x 1) 		1 by_platform
by_series
11 Purification of neuronal precursors from the adult mouse brain: a comprehensive gene expression analysis (GSE9081) [SAGE NlaIII] SAGE:11:NlaIII:Mus musculus (GPL5885) Miltenyi Biotec GmbH 2007-09-18 Mus musculus
Mus musculus		 23,364
(23,364 x 1) 		1 by_platform
by_series
12 Global analysis of lipid metabolism regulation in Brassica napus developing seeds (GSE7204) [SAGE NlaIII] SAGE:10:NlaIII:Brassica napus (GPL4919) Institute of Plant Physiology & Ecology 2007-03-06 Brassica napus
Brassica napus		 23,895
(23,895 x 1) 		1 by_platform
by_series
13 Spore formation of Lentinula edodes (GSE4202) [SAGE NlaIII] SAGE:10:NlaIII:Lentinula edodes (GPL1457) The Chinese University of Hong Kong 2006-02-07 Lentinula edodes
Lentinula edodes		 24,846
(12,423 x 2) 		1 1 by_platform
by_series
14 No accelerated rate of protein evolution in male biased Drosophila pseudoobscura genes (GSE2840) [SAGE NlaIII] SAGE:10:NlaIII:Drosophila pseudoobscura (GPL2537) Veterinärmedizinische Universität Wien 2005-06-25 Drosophila pseudoobscura
Drosophila pseudoobscura		 25,008
(12,504 x 2) 		2 by_platform
by_series
15 Embryo development of Medicago truncatula (GSE74) [SAGE NlaIII] SAGE:10:NlaIII:Medicago truncatula (GPL184) Samuel Roberts Noble Foundation 2002-07-24 Medicago truncatula
Medicago truncatula		 26,310
(8,770 x 3) 		1 2 by_platform
by_series
16 The expression profiles of promastigotes and axenic amastigotes in Leishmania donovani (GSE3835) [SAGE NlaIII] SAGE:10:NlaIII:Leishmania donovani (GPL3252) Shanghai Jiao Tong University 2005-12-14 Leishmania donovani
Leishmania donovani		 29,986
(14,993 x 2) 		1 1 by_platform
by_series
17 Zebrafish ovarian follicle transcriptome (GSE3679) [SAGE NlaIII] SAGE:10:NlaIII:Danio rerio (GPL3209) Université Bordeaux 2005-11-25 Danio rerio
Danio rerio		 31,188
(31,188 x 1) 		1 by_platform
by_series
18 SuperSAGE: The drought stress-responsive transcriptome of chickpea roots (GSE12812) [SAGE NlaIII] SAGE:26:NlaIII:Cicer arietinum (GPL7318) INRA 2008-09-17 Cicer arietinum
Cicer arietinum		 34,998
(17,499 x 2) 		2 by_platform
by_series
19 RL-SAGE analysis of Zea mays leaf transcriptome (GSE25994) [SAGE NlaIII] SAGE:17:NlaIII:Zea mays (GPL1462) Ohio State University 2010-12-10 Zea mays
Zea mays		 44,870
(44,870 x 1) 		1 by_platform
by_series
20 Analysis of Gene Expression in the Chicken Otocyst (GSE27176) [SAGE NlaIII] SAGE:17:NlaIII:Gallus gallus (GPL1477) Stanford University 2011-02-09 Gallus gallus
Gallus gallus		 48,341
(48,341 x 1) 		1 by_platform
by_series
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