Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(16,580)		   Tiling Array
(3,529)		   cDNA Array
(5,792)		   Oligo Array
(11,628)		   Bead Array
(2,848)		   Protein Array
(1)		   Antibody
(37)		   RT-PCR
(223)		   HT-Seq
(4,411)		   Other
(158)		   All
(45,516)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 RL-SAGE analysis of Zea mays leaf transcriptome (GSE25994) [SAGE NlaIII] SAGE:17:NlaIII:Zea mays (GPL1462) Ohio State University 2010-12-10 Zea mays
Zea mays		 44,870
(44,870 x 1) 		1 by_platform
by_series
2 SAGE analysis of maize root segments (GSE25761) [SAGE NlaIII] SAGE:10:NlaIII:Zea mays (GPL1244) University of Illinois 2010-12-01 Zea mays
Zea mays		 14,850
(14,850 x 1) 		1 by_platform
by_series
3 In vitro generation of human high-density-lipoprotein-resistant Trypanosoma brucei brucei (GSE8369) [SAGE NlaIII] SAGE:17:NlaIII:Trypanosoma brucei brucei (GPL5464) Andrew McArthur Consulting 2007-07-03 Trypanosoma brucei brucei
Trypanosoma brucei brucei		 50,146
(25,073 x 2) 		2 by_platform
by_series
4 SAGE tags generated from Triticum aestivum cultivars Scorpion 25 and Xi19 grown under normal and hot/dry conditions (GSE12832) [SAGE NlaIII] SAGE:15:NlaIII:Triticum aestivum (GPL7079) University of Bristol 2008-09-18 Triticum aestivum
Triticum aestivum		 234,240
(39,040 x 6) 		6 by_platform
by_series
5 PRRSV-infection of porcine alveolar macrophages (GSE10346) [SAGE NlaIII] SAGE:10:NlaIII:Sus scrofa (GPL1270) National Animal Disease Center 2008-01-31 Sus scrofa
Sus scrofa domestica		 685,235
(137,047 x 5) 		4 1 by_platform
by_series
6 LongSAGE analysis in skeletal muscle at three prenatal stages in lean and obese pig breeds (GSE5494) [SAGE NlaIII] SAGE:17:NlaIII:Sus scrofa (GPL4061) Chinese Academy of Agricultural Sciences 2006-08-10 Sus scrofa
Sus scrofa domestica		 653,232
(108,872 x 6) 		6 by_platform
by_series
7 SAGE: gene expression in pigs of two commercial lines at the 3 and 9 months og age (GSE6062) [SAGE NlaIII] SAGE:17:NlaIII:Sus scrofa (GPL4061) university of trieste 2006-10-18 Sus scrofa
Sus scrofa domestica		 435,488
(108,872 x 4) 		4 by_platform
by_series
8 Molecular mechanisms in Day 11 and Day 12 pre-implantation porcine embryos (GSE1453) [SAGE NlaIII] SAGE:10:NlaIII:Sus scrofa (GPL1270) ANRI 2004-06-01 Sus scrofa
Sus scrofa domestica		 274,094
(137,047 x 2) 		2 by_platform
by_series
9 Comparison of Gene Expression from Day 6 In Vivo- and In Vitro-Produced Porcine Blastocysts (GSE5571) [SAGE NlaIII] SAGE:10:NlaIII:Sus scrofa (GPL1270) USDA-ARS 2006-08-22 Sus scrofa
Sus scrofa domestica		 274,094
(137,047 x 2) 		2 by_platform
by_series
10 D11.5 Tubular Porcine Conceptus (GSE3875) [SAGE NlaIII] SAGE:10:NlaIII:Sus scrofa (GPL1270) ARS-USDA 2005-12-19 Sus scrofa
Sus scrofa domestica		 137,047
(137,047 x 1) 		1 by_platform
by_series
11 EST mining of yellow potato and gene expression profiling of its infection by P. infestans using SAGE - SOLEXA (GSE11781) [SAGE NlaIII] SAGE:17:NlaIII:Solanum phureja (GPL6957) Universidad de los Andes 2008-06-13 Solanum phureja
Solanum phureja		 45,754,758
(7,625,793 x 6) 		6 by_platform
by_series
12 Gene expression profiling of Schistosoma mansoni larval development using serial analysis of gene expression (SAGE) (GSE9722) [SAGE NlaIII] SAGE:17:NlaIII:Schistosoma mansoni (GPL5463) Andrew McArthur Consulting 2007-11-28 Schistosoma mansoni
Schistosoma mansoni		 302,175
(60,435 x 5) 		5 by_platform
by_series
13 Nitric oxide-dependent changes in Schistosoma mansoni gene expression (GSE8366) [SAGE NlaIII] SAGE:17:NlaIII:Schistosoma mansoni (GPL5463) Andrew McArthur Consulting 2007-07-03 Schistosoma mansoni
Schistosoma mansoni		 120,870
(60,435 x 2) 		2 by_platform
by_series
14 High-resolution genome-wide mapping of histone modifications. (GSE6975) [SAGE NlaIII] GMAT (Genome-wide MApping Technique) [NlaIII: Saccharomyces cerevisiae] tag list (GPL4813) NHLBI, NIH 2007-02-06 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 194,228
(48,557 x 4) 		4 by_platform
by_series
15 SAGE in Rhipicephalus (Boophilus) microplus following OP treatment of larvae from OP resistant/susceptible strains. (GSE10109) [SAGE NlaIII] SAGE:10:NlaIII:Rhipicephalus microplus (GPL6351) USDA 2008-01-08 Rhipicephalus microplus
Rhipicephalus microplus		 75,164
(18,791 x 4) 		4 by_platform
by_series
16 Babesia Infected/Control LongSAGE libraries for Boophilus microplus ovary tissue (GSE9880) [SAGE NlaIII] SAGE:17:NlaIII:Rhipicephalus microplus (GPL6274) USDA 2007-12-13 Rhipicephalus microplus
Rhipicephalus microplus		 16,900
(8,450 x 2) 		2 by_platform
by_series
17 Rat Chondrosarcoma (GSE1517) [SAGE NlaIII] SAGE:10:NlaIII:Rattus norvegicus (GPL23) University of Iowa 2004-06-29 Rattus norvegicus
Rattus norvegicus		 954,425
(190,885 x 5) 		5 by_platform
by_series
18 SAGE Profiles of Rat Lung Tissues (GSE2475) [SAGE NlaIII] SAGE:10:NlaIII:Rattus norvegicus (GPL23) Shanghai University of Traditional Chinese Medicine 2005-04-02 Rattus norvegicus
Rattus norvegicus		 763,540
(190,885 x 4) 		4 by_platform
by_series
19 Rat Normal Cochlear Nucleus (GSE3628) [SAGE NlaIII] SAGE:10:NlaIII:Rattus norvegicus (GPL23) Medical College of Wisconsin 2005-11-17 Rattus norvegicus
Rattus norvegicus		 572,655
(190,885 x 3) 		3 by_platform
by_series
20 Corticosteroid responsive genes (GSE787) [SAGE NlaIII] SAGE:10:NlaIII:Rattus norvegicus (GPL23) Leiden University 2003-10-30 Rattus norvegicus
Rattus norvegicus		 572,655
(190,885 x 3) 		3 by_platform
by_series
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