Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,625)		   Primates
(206)		   Rodents
(12,612)		   Mammals
(782)		   Vertebrates
(1,156)		   Invertebrates
(4,045)		   Plants
(6,642)		   Bacteria
(2,980)		   Viruses
(50)		   Phages
(4)		   Unclassified
(287)		   All
(47,440)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(17,192)		   Tiling Array
(3,579)		   cDNA Array
(5,850)		   Oligo Array
(12,094)		   Bead Array
(3,016)		   Protein Array
(1)		   Antibody
(39)		   RT-PCR
(246)		   HT-Seq
(4,931)		   Other
(183)		   All
(47,440)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Large scale gene expression of Vero cell correlated to infection of infectious bursal disease virus (GSE6243) [SAGE NlaIII] SAGE:17:NlaIII:Chlorocebus aethiops (GPL4510) Zhejiang University 2006-11-08 Chlorocebus aethiops
Chlorocebus aethiops		 122,375
(24,475 x 5) 		5 by_platform
by_series
2 Targets of c-Jun NH(2)-terminal kinase 2-mediated tumor growth regulation (GSE508) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) Yale University School of Medicine 2003-07-02 Homo sapiens
Homo sapiens		 1,602,902
(801,451 x 2) 		2 by_platform
by_series
3 Nutrient-regulated transcriptional responses in the brown tide forming alga Aureococcus anophagefferens (GSE21465) [SAGE NlaIII] SAGE:17:NlaIII:Aureococcus anophagefferens (GPL10346) Woods Hole Oceanographic Institution 2010-04-22 Aureococcus anophagefferens
Aureococcus anophagefferens		 95,586
(31,862 x 3) 		3 by_platform
by_series
4 Pancreas and islet gene expression (GSE278) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) Washington University School of Medicine 2003-02-05 Homo sapiens
Homo sapiens		 2,404,353
(801,451 x 3) 		3 by_platform
by_series
5 PBECs stimulated with pro-inflammatory cytokines and P. aeruginosa (GSE2056) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) Vrije Universiteit Medisch Centrum 2004-12-09 Homo sapiens
Homo sapiens		 2,404,353
(801,451 x 3) 		3 by_platform
by_series
6 No accelerated rate of protein evolution in male biased Drosophila pseudoobscura genes (GSE2840) [SAGE NlaIII] SAGE:10:NlaIII:Drosophila pseudoobscura (GPL2537) Veterinärmedizinische Universität Wien 2005-06-25 Drosophila pseudoobscura
Drosophila pseudoobscura		 25,008
(12,504 x 2) 		2 by_platform
by_series
7 Differential gene expression analysis of iodide treated rat thyroid follicular cell line PCCl3 (GSE7174) [SAGE NlaIII] SAGE:10:NlaIII:Rattus norvegicus (GPL23) USP - University of Sao Paulo 2007-03-02 Rattus norvegicus
Rattus norvegicus		 381,770
(190,885 x 2) 		2 by_platform
by_series
8 Gene expression in bovine mammary gland in response to increased milking frequency as determined by microarray and SAGE (GSE9344) [SAGE NlaIII] SAGE:10:NlaIII:Bos taurus (GPL223) USDA-ARS, BARC 2007-10-16 Bos taurus
Bos taurus		 230,368
(115,184 x 2) 		2 by_platform
by_series
9 Comparison of Gene Expression from Day 6 In Vivo- and In Vitro-Produced Porcine Blastocysts (GSE5571) [SAGE NlaIII] SAGE:10:NlaIII:Sus scrofa (GPL1270) USDA-ARS 2006-08-22 Sus scrofa
Sus scrofa domestica		 274,094
(137,047 x 2) 		2 by_platform
by_series
10 Changes in transcription patterns in BoMac cells in response to PDD spirochetes (GSE6702) [SAGE NlaIII] SAGE:10:NlaIII:Bos taurus (GPL223) USDA, ARS, NADC 2007-01-10 Bos taurus
Bos taurus		 230,368
(115,184 x 2) 		2 by_platform
by_series
11 Sperm storage mechanisms in poultry (GSE351) [SAGE NlaIII] SAGE:10:NlaIII:Meleagris gallopavo (GPL279) USDA ARS Animal and Natural Resources Institute 2003-03-20 Meleagris gallopavo
Meleagris gallopavo		 54,860
(27,430 x 2) 		2 by_platform
by_series
12 SAGE in Rhipicephalus (Boophilus) microplus following OP treatment of larvae from OP resistant/susceptible strains. (GSE10109) [SAGE NlaIII] SAGE:10:NlaIII:Rhipicephalus microplus (GPL6351) USDA 2008-01-08 Rhipicephalus microplus
Rhipicephalus microplus		 75,164
(18,791 x 4) 		4 by_platform
by_series
13 Babesia Infected/Control LongSAGE libraries for Boophilus microplus ovary tissue (GSE9880) [SAGE NlaIII] SAGE:17:NlaIII:Rhipicephalus microplus (GPL6274) USDA 2007-12-13 Rhipicephalus microplus
Rhipicephalus microplus		 16,900
(8,450 x 2) 		2 by_platform
by_series
14 SAGE: gene expression in pigs of two commercial lines at the 3 and 9 months og age (GSE6062) [SAGE NlaIII] SAGE:17:NlaIII:Sus scrofa (GPL4061) university of trieste 2006-10-18 Sus scrofa
Sus scrofa domestica		 435,488
(108,872 x 4) 		4 by_platform
by_series
15 Normal and injured liver sinusoidal endothelial cells (GSE1689) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) University of Tokyo 2004-08-18 Mus musculus
Mus musculus		 1,579,064
(789,532 x 2) 		2 by_platform
by_series
16 Genome wide mapping of transcription factor downstream targets using STAGE (GSE6312) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) University of Texas at Austin 2006-11-17 Homo sapiens
Homo sapiens		 12,442,314
(6,221,157 x 2) 		1 1 by_platform
by_series
17 Grass shrimp SAGE libraries (GSE4853) [SAGE NlaIII] SAGE:17:NlaIII:Palaemonetes pugio (GPL3770) University of Southern Mississippi 2006-05-16 Palaemonetes pugio
Palaemonetes pugio		 55,016
(13,754 x 4) 		4 by_platform
by_series
18 LongSAGE during the initiation of ligninolytic enzymes production in Phanerochaete chrysosporium (GSE6649) [SAGE NlaIII] SAGE:17:NlaIII:Phanerochaete chrysosporium (GPL4722) University of Shiga Prefecture 2007-01-04 Phanerochaete chrysosporium
Phanerochaete chrysosporium		 22,048
(11,024 x 2) 		2 by_platform
by_series
19 Young and old muscle comparison (GSE17) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) University of Rochester 2002-02-01 Homo sapiens
Homo sapiens		 1,602,902
(801,451 x 2) 		2 by_platform
by_series
20 Comparative SAGE Analysis of the Response to Hypoxia in Human Pulmonary and Aortic Endothelial Cells (GSE2838) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) University of Pittsburgh 2005-06-25 Homo sapiens
Homo sapiens		 4,808,706
(801,451 x 6) 		6 by_platform
by_series
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