Gene Expression Omnibus (GEO) Overview Version:2013-05-25Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(441)
  Primates
(36)
  Rodents
(268)
  Mammals
(2)
  Vertebrates
(0)
  Invertebrates
(57)
  Plants
(63)
  Bacteria
(55)
  Viruses
(0)
  Phages
(0)
  Unclassified
(0)
  All
(922)
 
  SAGE NlaIII
(11)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(430)
  Tiling Array
(0)
  cDNA Array
(477)
  Oligo Array
(0)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(4)
  All
(922)
 
  brain
(0)
  blood
(3)
  connective
(1)
  reproductive
(1)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(1)
  unclassified
(5)
  all
(11)
 
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM3245 CD4 T-cells 23,666 Academic Medical Centre, University of Amsterdam 2002-12-17 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
lymphnode CD4+ T-cells isolated from a single healthy donor
2 GSM3244 KS-48 21,482 Academic Medical Centre, University of Amsterdam 2002-12-17 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
unclassified source_name:AIDS-KS lesion title:KS-48 description:SAGE library generated grom a KS lesion from an AIDS-KS patient. Biopsy was taken 48 hours after chemotherapy with adriamycine, bleomycine, and vincristine.
3 GSM3243 KS-24 20,807 Academic Medical Centre, University of Amsterdam 2002-12-17 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
unclassified source_name:AIDS-KS lesion title:KS-24 description:SAGE library generated from a KS lesion from an AIDS-KS patient. Biopsy was taken 24 hours after treatment with adriamycine, bleomycine, and vincristine.
4 GSM3241 AIDS-KSb 16,881 Academic Medical Centre, University of Amsterdam 2002-12-17 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
unclassified source_name:AIDS-KS nodular lesion title:AIDS-KSb description:SAGE library derived from a nodular KS lesion of an AIDS-KS patient. Sample was taken at autopsy (1986). Patient died of AIDS-KS, and received vinblastine therapy till two weeks before death.
5 GSM3036 Bovine Renal Glomerular Endothelial Cells 16,699 Albert Einstein College of Medicine 2002-12-04 [SAGE NlaIII] SAGE:10:NlaIII:Bos taurus (GPL223) SAGE Bos taurus
Bos taurus
vein Cultured Primary Glomerular Endothelial Cells
6 GSM3240 AIDS-KSa 16,359 Academic Medical Centre, University of Amsterdam 2002-12-17 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
skin SAGE library derived from a nodular skin lesion of an AIDS-KS patient taken at autopsy (1986).
7 GSM3242 NS 15,316 Academic Medical Centre, University of Amsterdam 2002-12-17 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
pooled normal skin pooled from 3 breast reductions
8 GSM3037 Bovine Aortic Endothelial Cells 12,122 Albert Einstein College of Medicine 2002-12-04 [SAGE NlaIII] SAGE:10:NlaIII:Bos taurus (GPL223) SAGE Bos taurus
Bos taurus
artery/aorta Cultured Bovine Aortic Endothelial Cells
9 GSM2575 ATDC5 undifferentiated 10,282 GSF - National Research Center for Environment and Health 2002-11-04 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
unclassified source_name:ATDC5 cells title:ATDC5 undifferentiated description:SAGE library made from undifferentiated ATDC5 cells at confluence
10 GSM2576 ATDC5, BMP4 induced 10,102 GSF - National Research Center for Environment and Health 2002-11-04 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
unclassified source_name:ATDC5 cells title:ATDC5, BMP4 induced description:SAGE library made from BMP4-induced ATDC5 cells
11 GSM2455 SAGE_cervix_normal_B_1 8,082 Mexican Institute for Social Security 2002-10-03 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
uterus normal exocervix