Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page

An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Human (502,421)   Primates (4,928)   Rodents (181,106)   Mammals (16,260)   Vertebrates (18,263)   Invertebrates (37,338)   Plants (91,454)   Bacteria (39,082)   Viruses (1,266)   Phages (101)   Unclassified (5,242)   All (898,944)

SAGE NlaIII (1,683)   SAGE RsaI (3)   SAGE Sau3A (54)   MPSS (439)   GeneChip (377,145)   Tiling Array (21,846)   cDNA Array (103,476)   Oligo Array (239,584)   Bead Array (106,999)   Protein Array (5)   Antibody (1,152)   RT-PCR (3,959)   HT-Seq (35,574)   Other (6,909)   All (898,944)     brain (348)   blood (223)   connective (120)   reproductive (104)   muscular (0)   digestive (70)   liver (29)   lung (108)   urinary (0)   endo/exo-crine (210)   embryo (0)   adult aerial structure (0)   young aerial structure (0)   root (0)   meristem/growing tissue (0)   flower/sexual organ (0)   seed/fruit/grain (0)   pooled (95)   unclassified (105)   all (1,683)   1   |   2   |   3   |   4   |   5      »      [85] Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification Keywords used for the classification are shown with bold font. 1 GSM874209 G11 87,510 浙江大学生物所 2012-02-12 [SAGE NlaIII] SAGE:17:NlaIII:Magnaporthe grisea (GPL15220) SAGE Magnaporthe grisea unclassified source_name:Guy11-Tag_counts title:G11 2 GSM874210 T146 82,297 浙江大学生物所 2012-02-12 [SAGE NlaIII] SAGE:17:NlaIII:Magnaporthe grisea (GPL15220) SAGE Magnaporthe grisea unclassified source_name:T146- Tag_counts title:T146 3 GSM768609 oral_severedysplasia_1444 53,107 BC Cancer Agency Research Centre 2011-07-28 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens skin oral biopsy, right posterior trigone 4 GSM768642 oral_moderatedysplasia_1427 40,585 BC Cancer Agency Research Centre 2011-07-28 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens skin oral biopsy, left lateral tongue 5 GSM768603 oral_severedysplasia_1404 39,112 BC Cancer Agency Research Centre 2011-07-28 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens skin oral biopsy, right ventral tongue 6 GSM768643 oral_severedysplasia_1599 37,497 BC Cancer Agency Research Centre 2011-07-28 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens skin oral biopsy, left ventral tongue 7 GSM768594 oral_severedysplasia_1028 36,908 BC Cancer Agency Research Centre 2011-07-28 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens skin oral biopsy, right lateral tongue 8 GSM768602 oral_moderatedysplasia_1404 35,970 BC Cancer Agency Research Centre 2011-07-28 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens skin oral biopsy, right ventral tongue 9 GSM768641 oral_milddysplasia_1460 35,601 BC Cancer Agency Research Centre 2011-07-28 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens skin oral biopsy, right buccal mucosa 10 GSM768595 oral_moderatedysplasia_1028 34,754 BC Cancer Agency Research Centre 2011-07-28 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens skin oral biopsy, right lateral tongue 11 GSM768597 oral_moderatedysplasia2_1028 33,351 BC Cancer Agency Research Centre 2011-07-28 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens skin oral biopsy, right lateral tongue 12 GSM768610 oral_milddysplasia_1434 31,212 BC Cancer Agency Research Centre 2011-07-28 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens skin oral biopsy, left floor of mouth 13 GSM652443 LongSAGE Leishmania infantum chagasi 8,016 INSTITUTO DE DOENÇAS TROPICAIS NATAN PORTELLA 2011-01-10 [SAGE NlaIII] SAGE:17:NlaIII:Leishmania chagasi (GPL11414) SAGE Leishmania chagasi unclassified source_name:Leishmania infantum chagasi promastigote cells title:LongSAGE Leishmania infantum chagasi description:leishmania infantum chagasi is the causative agent of visceral leishmaniasis in the New World. 14 GSM651351 Analysis of Gene Expression in the Chicken Otocyst 16,008 Stanford University 2011-01-07 [SAGE NlaIII] SAGE:17:NlaIII:Gallus gallus (GPL1477) SAGE Gallus gallus cerebrum Chicken otocyst, Embryonic day 3 15 GSM641894 CTC_lymphocyteTCD8_HTLV_HAM 20,784 Faculdade de Medicina de Ribeirão Preto (Universidade de São Paulo) 2010-12-17 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens pooled Peripheral Blood CD8+ T Lymphocytes isolated from HTLV-1 associated myelopathy/tropical spastic paraparesis (HAM/TSP) infected individuals 16 GSM641893 CTC_lymphocyteTCD8_HTLV_HAC 18,492 Faculdade de Medicina de Ribeirão Preto (Universidade de São Paulo) 2010-12-17 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens pooled Peripheral Blood CD8+ T Lymphocytes isolated from HTLV-1 asymptomatic carriers (HAC) 17 GSM625363 Lentinula edodes-mature fruit body after spore formation (LongSAGE) 510 The Chinese University of Hong Kong 2010-11-18 [SAGE NlaIII] SAGE:15:NlaIII:Lentinula edodes (GPL11229) SAGE Lentinula edodes pooled Lentinula edodes-mature fruit body after spore formation (LongSAGE) 18 GSM625362 Lentinula edodes-mature fruit body before sporulation (LongSAGE) 378 The Chinese University of Hong Kong 2010-11-18 [SAGE NlaIII] SAGE:15:NlaIII:Lentinula edodes (GPL11229) SAGE Lentinula edodes unclassified source_name:Strain L54 of Lentinula edodes (Shiitake mushroom) title:Lentinula edodes-mature fruit body before sporulation (LongSAGE) description:To facilitate comparison of LongSAGE and SAGE data in GEO, LongSAGE tags (15bp) were trimmed to become 10bp and uploaded in previous submission (GSM87320, GSM87321). The current submission are actual LongSAGE experimental data without any extrapolation from SAGE data. 19 GSM569313 Bombyx mori Posterior Silk Gland SAGE library 6,768 CNRS-University Lyon 1 2010-07-23 [SAGE NlaIII] SAGE:10:NlaIII:Bombyx mori (GPL2095) SAGE Bombyx mori breast Posterior Silk Gland of Bombyx mori, fith instar, day 3 20 GSM569314 Bombyx mori Middle Silk Gland SAGE library 3,781 CNRS-University Lyon 1 2010-07-23 [SAGE NlaIII] SAGE:10:NlaIII:Bombyx mori (GPL2095) SAGE Bombyx mori breast Middle Silk Gland of Bombyx mori, fith instar, day 3 1   |   2   |   3   |   4   |   5      »      [85]