Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(6,761)
  Primates
(4)
  Rodents
(3,703)
  Mammals
(141)
  Vertebrates
(405)
  Invertebrates
(831)
  Plants
(1,401)
  Bacteria
(717)
  Viruses
(12)
  Phages
(0)
  Unclassified
(18)
  All
(13,993)
 
  SAGE NlaIII
(219)
  SAGE RsaI
(0)
  SAGE Sau3A
(1)
  MPSS
(5)
  GeneChip
(6,761)
  Tiling Array
(226)
  cDNA Array
(3,605)
  Oligo Array
(3,107)
  Bead Array
(64)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(5)
  All
(13,993)
 
  brain
(80)
  blood
(10)
  connective
(6)
  reproductive
(14)
  muscular
(12)
  digestive
(15)
  liver
(6)
  lung
(6)
  urinary
(15)
  endo/exo-crine
(23)
  embryo
(13)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(2)
  unclassified
(17)
  all
(219)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM109148 Grass Shrimp Endosulfan-exposed Library 5,286 University of Southern Mississippi 2006-05-16 [SAGE NlaIII] SAGE:17:NlaIII:Palaemonetes pugio (GPL3770) SAGE Palaemon,unidentified
Palaemon,unidentified
unclassified source_name:Grass shrimp Endosulfan-exposed title:Grass Shrimp Endosulfan-exposed Library description:This library was constructed from Endosulfan-exposed shrimp in an exposure to identify differentially expressed genes in shrimp following exposure to fipronil, endosulfan, or cadmium.
2 GSM109146 Grass Shrimp Control Library 4,814 University of Southern Mississippi 2006-05-16 [SAGE NlaIII] SAGE:17:NlaIII:Palaemonetes pugio (GPL3770) SAGE Palaemon,unidentified
Palaemon,unidentified
unclassified source_name:Grass shrimp control title:Grass Shrimp Control Library description:This library was constructed from control shrimp in an exposure to identify differentially expressed genes in shrimp following exposure to fipronil, endosulfan, or cadmium.
3 GSM109150 Grass Shrimp Cadmium-exposed Library 4,519 University of Southern Mississippi 2006-05-16 [SAGE NlaIII] SAGE:17:NlaIII:Palaemonetes pugio (GPL3770) SAGE Palaemon,unidentified
Palaemon,unidentified
unclassified source_name:Grass shrimp Cadmium-exposed title:Grass Shrimp Cadmium-exposed Library description:This library was constructed from Cadmium-exposed shrimp in an exposure to identify differentially expressed genes in shrimp following exposure to fipronil, endosulfan, or cadmium.
4 GSM109147 Grass Shrimp Fipronil-exposed Library 3,189 University of Southern Mississippi 2006-05-16 [SAGE NlaIII] SAGE:17:NlaIII:Palaemonetes pugio (GPL3770) SAGE Palaemon,unidentified
Palaemon,unidentified
unclassified source_name:Grass shrimp Fipronil-exposed title:Grass Shrimp Fipronil-exposed Library description:This library was constructed from Fipronil-exposed shrimp in an exposure to identify differentially expressed genes in shrimp following exposure to fipronil, endosulfan, or cadmium.
5 GSM106656 mLSAGE_Kidney_normal_P84_MMD_SM104 99,439 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
kidney Kidney, normal
6 GSM106650 mLSAGE_Large_intestine_normal_TS25_MMD_SM096 47,194 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
intestine Large_intestine, normal
7 GSM106601 mLSAGE_Brain_normal_P20_MMD_SM031 43,485 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
cerebrum Brain, normal
8 GSM113286 mLSAGE_Brain_normal_P27_MMD_SM097 41,692 Canada's Michael Smith Genome Sciences Centre 2006-06-06 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
cerebrum Brain, normal
9 GSM106666 mLSAGE_Testis_normal_P84_MMD_SM118 39,467 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
testis Testis, normal
10 GSM113285 mLSAGE_Embryo_normal_TS1_MMD_SM077 39,155 Canada's Michael Smith Genome Sciences Centre 2006-06-06 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
embryo Embryo, normal
11 GSM113290 mLSAGE_Lung_normal_TS19_MMD_SM127 39,062 Canada's Michael Smith Genome Sciences Centre 2006-06-06 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
lung Lung, normal
12 GSM106679 mLSAGE_Pituitary_gland_normal_TS23_MMD_SM133 37,999 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
pituitary Pituitary_gland, normal
13 GSM106662 mLSAGE_Brain_normal_TS25_MMD_SM111 37,267 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
cerebrum Brain, normal
14 GSM113272 mLSAGE_Heart_normal_TS15_MMD_SM007 37,002 Canada's Michael Smith Genome Sciences Centre 2006-06-06 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
heart Heart, normal
15 GSM106618 mLSAGE_Brain_normal_TS17_MMD_SM056 36,974 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
cerebrum Brain, normal
16 GSM106594 mLSAGE_Lung_normal_P0_MMD_SM021 36,939 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
lung Lung, normal
17 GSM113273 mLSAGE_Heart_normal_TS19_MMD_SM008 36,595 Canada's Michael Smith Genome Sciences Centre 2006-06-06 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
heart Heart, normal
18 GSM113279 mLSAGE_Urogenital_sinus_normal_TS24_MMD_SM065 35,687 Canada's Michael Smith Genome Sciences Centre 2006-06-06 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
bladder Urogenital_sinus, normal
19 GSM113295 mLSAGE_Liver_normal_TS15_MMD_SM158 35,294 Canada's Michael Smith Genome Sciences Centre 2006-06-06 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
liver/hepato Liver, normal
20 GSM113283 mLSAGE_Brain_normal_P27_MMD_SM073 34,912 Canada's Michael Smith Genome Sciences Centre 2006-06-06 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
cerebrum Brain, normal
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