Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(6,763)		   Primates
(4)		   Rodents
(3,704)		   Mammals
(141)		   Vertebrates
(405)		   Invertebrates
(835)		   Plants
(1,401)		   Bacteria
(717)		   Viruses
(12)		   Phages
(0)		   Unclassified
(14)		   All
(13,996)		  
  SAGE NlaIII
(219)		   SAGE RsaI
(0)		   SAGE Sau3A
(1)		   MPSS
(5)		   GeneChip
(6,764)		   Tiling Array
(226)		   cDNA Array
(3,605)		   Oligo Array
(3,107)		   Bead Array
(64)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(5)		   All
(13,996)		  
  brain
(80)		   blood
(10)		   connective
(6)		   reproductive
(14)		   muscular
(12)		   digestive
(15)		   liver
(6)		   lung
(6)		   urinary
(15)		   endo/exo-crine
(23)		   embryo
(13)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(2)		   unclassified
(17)		   all
(219)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM110380 Squamous esophagus long-term primary cell culture 13,816 University Medical Center Utrecht 2006-05-24 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 esophagus Squamous esophagus long-term primary cell culture
2 GSM112812 Neuroblastoma_primary_stage4_NB9 12,385 University Children's Hospital 2006-06-06 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 cerebrum Neuroblastoma, primary tumor, stage 4
3 GSM112810 Neuroblastoma_primary_stage4_NB7 10,767 University Children's Hospital 2006-06-06 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 cerebrum Neuroblastoma, primary tumor, stage 4
4 GSM112813 Neuroblastoma_primary_stage4_NB12 12,942 University Children's Hospital 2006-06-06 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 cerebrum Neuroblastoma, primary tumor, stage 4
5 GSM112809 Neuroblastoma_primary_stage4S_NB5 11,918 University Children's Hospital 2006-06-06 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 cerebrum Neuroblastoma, primary tumor, stage 4S
6 GSM112808 Neuroblastoma_primary_stage4S_NB2 13,235 University Children's Hospital 2006-06-06 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 cerebrum Neuroblastoma, primary tumor, stage 4S
7 GSM112797 Neuroblastoma_primary_stage4S_NB11 13,932 University Children's Hospital 2006-06-06 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 cerebrum Neuroblastoma, primary tumor, stage 4S
8 GSM112795 Neuroblastoma_primary_stage4S_NB10 12,473 University Children's Hospital 2006-06-06 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 cerebrum Neuroblastoma, primary tumor, stage 4S
9 GSM112807 Neuroblastoma_primary_stage4S_NB1 13,501 University Children's Hospital 2006-06-06 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 cerebrum Neuroblastoma, primary tumor, stage 4S
10 GSM112814 Neuroblastoma_CL_IMR5 4,034 University Children's Hospital 2006-06-06 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 cerebrum Neuroblastoma, cell line, IMR-5
11 GSM105767 NCSC 13,054 Newcastle University 2006-04-17 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 cerebrum Embryonic neural crest stem cells
12 GSM105765 NCP 16,052 Newcastle University 2006-04-17 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 cerebrum In vitro differentiated neural crest progeny
13 GSM106791 mSAGE_Spleen_normal_TS26_MMD_SM010 27,920 Canada's Michael Smith Genome Sciences Centre 2006-04-26 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 spleen Spleen, normal
14 GSM106793 mSAGE_Pancreas_normal_TS24_MMD_SM015 18,546 Canada's Michael Smith Genome Sciences Centre 2006-04-26 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 pancreas Pancreas, normal
15 GSM106792 mSAGE_Pancreas_normal_TS22_MMD_SM014 30,523 Canada's Michael Smith Genome Sciences Centre 2006-04-26 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 pancreas Pancreas, normal
16 GSM113301 mSAGE_Liver_normal_TS20_MMD_SM001 23,452 Canada's Michael Smith Genome Sciences Centre 2006-06-06 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 liver/hepato Liver, normal
17 GSM106790 mSAGE_Heart_normal_TS20_MMD_SM003 25,248 Canada's Michael Smith Genome Sciences Centre 2006-04-26 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 heart Heart, normal
18 GSM106630 mLSAGE_Uterus_normal_P36_MMD_SM075 26,615 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 uterus Uterus, normal
19 GSM106708 mLSAGE_Uterus_normal_P0_MMD_SM171 25,549 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 uterus Uterus, normal
20 GSM106707 mLSAGE_Urogenital_sinus_normal_TS24_MMD_SM170 31,345 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 bladder Urogenital_sinus, normal
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