Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(348)		   blood
(223)		   connective
(120)		   reproductive
(104)		   muscular
(67)		   digestive
(70)		   liver
(29)		   lung
(108)		   urinary
(44)		   endo/exo-crine
(210)		   embryo
(115)		   adult aerial structure
(23)		   young aerial structure
(1)		   root
(8)		   meristem/growing tissue
(7)		   flower/sexual organ
(3)		   seed/fruit/grain
(3)		   pooled
(95)		   unclassified
(105)		   all
(1,683)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM384149 LSAGE_Vein_normal_B_hs0237 322,395 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 vein LSAGE_Vein_normal_B_hs0237
2 GSM384118 LSAGE_Lymph_node_Lymphoma_B_hs0196 305,379 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 lymphnode lymph node, cancer, bulk, long sage, slx-sage, solexa sage, lymphoma
3 GSM384044 LSAGE_Bone_Marrow_Cancer_FS_hs0405 259,085 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 bone marrow bone marrow, cancer, flow-sorted, long sage, slx-sagelite, solexa sagelite, male, facs-sorted rna from single cml patient lin-cd38-rho-cells
4 GSM384148 LSAGE_Vein_normal_B_hs0230 245,459 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 vein LSAGE_Vein_normal_B_hs0230
5 GSM384123 LSAGE_Peripheral_Blood_Cancer_B_hs0430 204,169 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 peripheral blood other, cancer, bulk, long sage, slx-sage, solexa sage, male, peripheral blood from aml patient
6 GSM384122 LSAGE_Peripheral_Blood_Cancer_B_hs0429 189,175 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 peripheral blood other, cancer, bulk, long sage, slx-sage, solexa sage, male, peripheral blood from aml patient
7 GSM384045 LSAGE_Bone_Marrow_Normal_FS_hs0404 188,648 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 bone marrow bone marrow, normal, flow-sorted, adult, long sage, slx-sagelite, solexa sagelite, male and female, facs-sorted normal adult bone marrow lin-cd38-rho-cells
8 GSM384119 LSAGE_Lymph_node_Lymphoma_B_hs0204 173,750 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 lymphnode lymph node, cancer, bulk, long sage, slx-sage, solexa sage, male, diffuse large b cell lymphoma
9 GSM211666 CD4_T-cell_clone_activated_LongSAGE 152,600 University of Oxford 2007-07-19 [SAGE NlaIII] SAGE:21:NlaIII:Homo sapiens (GPL5624) SAGE Homo sapiens
Homo sapiens		 lymphnode human CD4+ T Cell clone 29
10 GSM384100 LSAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2 104,438 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 lymphnode embryonic stem cell, normal, cell line, h9, wa09, female, long sage, mef
11 GSM383879 SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2 80,314 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lymphnode embryonic stem cell, normal, cell line, h9, wa09, female, extracted short sage
12 GSM287566 primitive_hematopoietic_cells_enriched_for_multipotent_myeloid-skewed_progenitors 62,888 Canada's Michael Smith Genome Sciences Centre 2008-05-08 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 bone marrow Human embryonic stem cell-derived primitive hematopoietic cells enriched for multipotent myeloid-skewed progenitors
13 GSM384641 mLSAGE Vascular endothelium 48hr regenerating liver associated AP 48hrRLiEC 58,002 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 vein vascular, normal, endothelium, antibody purified, long sage, adult
14 GSM384647 mLSAGE_Vascular_endothelium_normal_brain_associated_AP_NBEC1 55,273 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 vein vascular, normal, endothelium, antibody purified, long sage, adult
15 GSM336393 MCL Long SAGE Library 03-10133 52,429 BC Cancer Research Centre 2008-10-23 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 lymphnode Lymph node Biopsy
16 GSM336397 MCL Long SAGE Library 03-14255 52,046 BC Cancer Research Centre 2008-10-23 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 lymphnode Lymph node biopsy
17 GSM336398 MCL Long SAGE Library 04-26157 47,927 BC Cancer Research Centre 2008-10-23 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 lymphnode Lymph node biopsy
18 GSM384645 mLSAGE_Vascular_endothelium_KM12SM_tumor_associated_AP_KM12TEC 47,202 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 vein vascular, tumor associated, endothelium, antibody purified, long sage, adult
19 GSM384426 mSAGE_Vascular_endothelium_normal_brain_associated_AP_NBEC1 45,771 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 vein vascular, normal, endothelium, antibody purified, extracted short sage, adult
20 GSM384420 mSAGE Vascular endothelium 48hr regenerating liver associated AP 48hrRLiEC 45,193 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 vein vascular, normal, endothelium, antibody purified, extracted short sage, adult
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