Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(391,468)		   Tiling Array
(22,222)		   cDNA Array
(104,397)		   Oligo Array
(247,270)		   Bead Array
(112,023)		   Protein Array
(5)		   Antibody
(1,160)		   RT-PCR
(4,486)		   HT-Seq
(39,106)		   Other
(7,515)		   All
(931,947)		  
  brain
(348)		   blood
(223)		   connective
(120)		   reproductive
(104)		   muscular
(67)		   digestive
(70)		   liver
(29)		   lung
(108)		   urinary
(44)		   endo/exo-crine
(210)		   embryo
(115)		   adult aerial structure
(23)		   young aerial structure
(1)		   root
(8)		   meristem/growing tissue
(7)		   flower/sexual organ
(3)		   seed/fruit/grain
(3)		   pooled
(95)		   unclassified
(105)		   all
(1,683)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM139481 whole brain_chinook_spring 9,492 Hatfield Marine Science Center, Oregon State University 2006-10-10 [SAGE NlaIII] SAGE:17:NlaIII:Oncorhynchus tshawytscha (GPL4407) SAGE Oncorhynchus tshawytscha
Oncorhynchus tshawytscha		 cerebrum whole brain_chinook_spring
2 GSM139482 whole brain_chinook_ocean 9,247 Hatfield Marine Science Center, Oregon State University 2006-10-10 [SAGE NlaIII] SAGE:17:NlaIII:Oncorhynchus tshawytscha (GPL4407) SAGE Oncorhynchus tshawytscha
Oncorhynchus tshawytscha		 cerebrum whole brain_chinook_ocean
3 GSM139480 whole brain_chinook_fall 8,054 Hatfield Marine Science Center, Oregon State University 2006-10-10 [SAGE NlaIII] SAGE:17:NlaIII:Oncorhynchus tshawytscha (GPL4407) SAGE Oncorhynchus tshawytscha
Oncorhynchus tshawytscha		 cerebrum whole brain_chinook_fall
4 GSM7498 Type 2 Gaucher brain 14,102 NIDDK 2003-06-23 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 cerebrum Type 2 Gaucher patient cerebral cortex gray matter, aged 8 months
5 GSM344584 SAGE_sympathetic neuron cell bodies 8,658 University College London 2008-11-21 [SAGE NlaIII] SAGE:17:NlaIII:Rattus norvegicus (GPL5330) SAGE Rattus norvegicus
Rattus norvegicus		 cerebrum Cell body mRNA from 12 DIV sympathetic neurons
6 GSM344585 SAGE_sympathetic neuron axons 2,389 University College London 2008-11-21 [SAGE NlaIII] SAGE:17:NlaIII:Rattus norvegicus (GPL5330) SAGE Rattus norvegicus
Rattus norvegicus		 cerebrum Axon mRNA from 12 DIV sympathetic neurons
7 GSM383992 SAGE_Spinal_cord_normal_B_1 19,676 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 spine spinal cord, bulk, normal, non-normalized, short SAGE
8 GSM383970 SAGE_Retina_Retinoblastoma_B_1 27,865 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 retina retina, bulk, retinoblastoma, long sage, poorly differentiated
9 GSM383969 SAGE_Retina_Pigment_epithelium_normal_B_1 38,358 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 retina retina, non-normalized, normal, epithelium, bulk, short SAGE
10 GSM383968 SAGE_Retina_Peripheral_normal_B_4Peri 47,840 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 retina retina, normal peripheral retina, normal, bulk, human, female, adult, short sage
11 GSM383967 SAGE_Retina_Peripheral_normal_B_2 34,066 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 retina retina, non-normalized, normal, bulk, short SAGE
12 GSM383966 SAGE_Retina_Peripheral_normal_B_1 22,812 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 retina retina, non-normalized, normal, bulk, short SAGE
13 GSM383965 SAGE_Retina_normal_B_4cRet 37,938 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 retina retina, central retina, normal, bulk, human, male, female, adult, extracted short sage
14 GSM383964 SAGE_Retina_macula_normal_B_HMAC2 33,522 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 retina retina, non-normalized, normal, macula, bulk, short sage
15 GSM383963 SAGE_Retina_Macula_normal_B_4Mac 37,560 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 retina retina, normal macular, normal, bulk, human, female, adult, short sage
16 GSM383971 SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE 35,324 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 retina retina, macular retinal pigment epithelium, normal, bulk, human, male, female, adult, short sage
17 GSM2415 SAGE_P23_cerebellum 9,472 The Ohio State University 2002-09-04 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 cerebellum P23 C57BL6/J mouse cerebellum
18 GSM38889 SAGE_hypothalamus_intact male mice 54,667 Penn State College of Medicine 2005-01-13 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 cerebrum hypothalamus
19 GSM38890 SAGE_hypothalamus_intact female mice 57,914 Penn State College of Medicine 2005-01-13 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 cerebrum hypothalamus
20 GSM75582 SAGE_hypothalamus_adrenalectomized male mice 3h after glucocorticoid injection 48,055 Penn State College of Medicine 2005-09-22 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 cerebrum hypothalamus
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