Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(348)		   blood
(223)		   connective
(120)		   reproductive
(104)		   muscular
(67)		   digestive
(70)		   liver
(29)		   lung
(108)		   urinary
(44)		   endo/exo-crine
(210)		   embryo
(115)		   adult aerial structure
(23)		   young aerial structure
(1)		   root
(8)		   meristem/growing tissue
(7)		   flower/sexual organ
(3)		   seed/fruit/grain
(3)		   pooled
(95)		   unclassified
(105)		   all
(1,683)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM25976 Adipose tissue of GDX + DHT 24h male mice 23,673 Molecular Endocrinology and Oncology Research Center, Laval University Medical Center (CHUL) 2004-06-23 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 adipos Retroperitoneal adipose tissue
2 GSM25975 Adipose tissue of GDX + DHT 3h male mice 18,099 Molecular Endocrinology and Oncology Research Center, Laval University Medical Center (CHUL) 2004-06-23 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 adipos Retroperitoneal adipose tissue
3 GSM25974 Adipose tissue of gonadectomized male mice 18,824 Molecular Endocrinology and Oncology Research Center, Laval University Medical Center (CHUL) 2004-06-23 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 adipos Retroperitoneal adipose tissue
4 GSM237078 African endemic Kaposi's sarcoma 16,443 Academic Medical Centre, University of Amsterdam 2007-10-12 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 skin Endemic Kaposi's sarcoma tissue
5 GSM3240 AIDS-KSa 16,359 Academic Medical Centre, University of Amsterdam 2002-12-17 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 skin SAGE library derived from a nodular skin lesion of an AIDS-KS patient taken at autopsy (1986).
6 GSM1125 AKAffected_Epidermis_skin 5,296 Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen 2002-02-12 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 skin Affected epidermis from AK patient
7 GSM1124 AKUnaffected_Epidermis_skin 6,375 Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen 2002-02-12 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 skin Unaffected epidermis from AK patient
8 GSM14918 AT dermal fibroblasts 21,345 British Columbia Cancer Agency 2004-01-07 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 skin A-T homozygous skin fibroblast cells
9 GSM14919 AT-TERT dermal fibroblasts 21,663 British Columbia Cancer Agency 2004-01-07 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 skin A-T homozygous skin fibroblast cells immortalized by telomerase overexpression
10 GSM14916 BJ dermal fibroblasts 21,839 British Columbia Cancer Agency 2004-01-07 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 skin BJ foreskin primary fibroblast cells
11 GSM14917 BJ-TERT dermal fibroblasts 14,774 British Columbia Cancer Agency 2004-01-07 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 skin BJ foreskin fibroblast cells immortalized by telomerase overexpression
12 GSM180018 C3 48,122 BCCRC 2007-04-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin LEEP cone biopsy of cervical tissue
13 GSM180019 C4 39,956 BCCRC 2007-04-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin LEEP cone biopsy of cervical tissue
14 GSM180020 C5 41,260 BCCRC 2007-04-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin LEEP cone biopsy of cervical tissue
15 GSM180021 C6 43,706 BCCRC 2007-04-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin LEEP cone biopsy of cervical tissue
16 GSM144008 Cervical Long SAGE Library C1 48,780 BCCRC 2006-11-08 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin Cervical Long SAGE Library C1
17 GSM144010 Cervical Long SAGE Library C2 41,567 BCCRC 2006-11-08 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin Cervical Long SAGE Library C2
18 GSM144012 Cervical Long SAGE Library N1 42,134 BCCRC 2006-11-08 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin Cervical Long SAGE Library N1
19 GSM144013 Cervical Long SAGE Library N2 43,597 BCCRC 2006-11-08 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin Cervical Long SAGE Library N2
20 GSM303349 CTC_Head&Neck_carcinoma_MD_SJR2T_AG 17,084 Faculdade de Medicina de Ribeirão Preto (Universidade de São Paulo) 2008-07-03 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 skin Laryngeal Squamous Cell Carcinoma (LSCC)
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