Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(348)		   blood
(223)		   connective
(120)		   reproductive
(104)		   muscular
(67)		   digestive
(70)		   liver
(29)		   lung
(108)		   urinary
(44)		   endo/exo-crine
(210)		   embryo
(115)		   adult aerial structure
(23)		   young aerial structure
(1)		   root
(8)		   meristem/growing tissue
(7)		   flower/sexual organ
(3)		   seed/fruit/grain
(3)		   pooled
(95)		   unclassified
(105)		   all
(1,683)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM537746 Aedes aegypti salivary gland tags, following infection with dengue virus 199,635 Human Genomic Institut 2010-04-27 [SAGE NlaIII] SAGE:17:NlaIII:Aedes aegypti (GPL10360) SAGE Aedes aegypti
Aedes aegypti		 salivary Aedes aegypti salivary gland tags, following infection with dengue virus
2 GSM537747 Aedes aegypti salivary gland tags 189,146 Human Genomic Institut 2010-04-27 [SAGE NlaIII] SAGE:17:NlaIII:Aedes aegypti (GPL10360) SAGE Aedes aegypti
Aedes aegypti		 salivary Aedes aegypti salivary gland tags
3 GSM207368 mLSAGE Pancreas normal Theiler Stage 19 MMD SM231 82,083 Canada's Michael Smith Genome Sciences Centre 2007-07-03 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 pancreas Mouse Pancreas TS19
4 GSM207537 mLSAGE Pancreas normal Theiler Stage 21 MMD SM249 80,460 Canada's Michael Smith Genome Sciences Centre 2007-07-04 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 pancreas Mouse Pancreas TS21
5 GSM207531 mLSAGE Pancreas normal Theiler Stage 20 MMD SM243 76,287 Canada's Michael Smith Genome Sciences Centre 2007-07-04 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 pancreas Mouse Pancreas TS20 N3N3-GFP+
6 GSM207532 mLSAGE Pancreas normal Theiler Stage 17 MMD SM244 74,348 Canada's Michael Smith Genome Sciences Centre 2007-07-04 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 pancreas Mouse Pancreas TS17 PDX1-GFP+
7 GSM207533 mLSAGE Pancreas normal Theiler Stage 20 MMD SM245 73,221 Canada's Michael Smith Genome Sciences Centre 2007-07-04 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 pancreas Mouse Pancreas TS20 N3N3-GFP-
8 GSM207369 mLSAGE Pancreas normal Theiler Stage 22 MMD SM232 63,461 Canada's Michael Smith Genome Sciences Centre 2007-07-03 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 pancreas Mouse Pancreas TS22
9 GSM384007 SAGE_Thyroid_follicular_adenoma_B_TT005 43,216 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 thyroid/parathyroid thyroid, adenoma, bulk, benign hyperplasia, short sage, adult, female
10 GSM137112 SAGE_pituitary_ gland intact male mice 42,684 Laval University 2006-09-21 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 pituitary pituitary gland
11 GSM38891 SAGE_pituitary_intact male mice 42,684 Penn State College of Medicine 2005-01-13 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 pituitary pituitary gland
12 GSM287584 Bipotent_CFC 40,640 Canada's Michael Smith Genome Sciences Centre 2008-05-08 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 breast Bipotent progenitor Enriched subpopulation of mammary cells
13 GSM287587 Diff-Basal 38,745 Canada's Michael Smith Genome Sciences Centre 2008-05-08 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 breast Differentiated basal Cells of mammary tissue
14 GSM106679 mLSAGE_Pituitary_gland_normal_TS23_MMD_SM133 37,999 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 pituitary Pituitary_gland, normal
15 GSM384352 mSAGE_Pituitary_gland_normal_TS23_MMD_SM133 37,851 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 pituitary pituitary gland, normal, microscope dissected, extracted short sage, ts23, mid-gestation embryo
16 GSM384008 SAGE_Thyroid_follicular_carcinoma_B_TT004 36,863 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 thyroid/parathyroid thyroid, carcinoma, bulk, adult, female, short sage
17 GSM384009 SAGE_Thyroid_normal_B_001 35,845 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 thyroid/parathyroid thyroid, normal, bulk, adult, female, short sage
18 GSM384080 LSAGE_Breast_normal_epithelium_CD44+_AP_N5 35,720 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 breast human, breast/mammary gland, antibody purified, normal, normal breast tissue reduction, cd44+ mammary epithelial cells, female, adult, long sage
19 GSM287586 Luminal-CFC 35,236 Canada's Michael Smith Genome Sciences Centre 2008-05-08 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 breast Committed luminal progenitor-enriched subpopulation of mammary cells
20 GSM384073 LSAGE_Breast_carcinoma_MD_LCIS 34,226 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 breast breast, carcinoma, microscope dissected, adult, female, long sage
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