Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(348)		   blood
(223)		   connective
(120)		   reproductive
(104)		   muscular
(67)		   digestive
(70)		   liver
(29)		   lung
(108)		   urinary
(44)		   endo/exo-crine
(210)		   embryo
(115)		   adult aerial structure
(23)		   young aerial structure
(1)		   root
(8)		   meristem/growing tissue
(7)		   flower/sexual organ
(3)		   seed/fruit/grain
(3)		   pooled
(95)		   unclassified
(105)		   all
(1,683)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM37337 PBEC_unstimulated 15,053 Vrije Universiteit Medisch Centrum 2004-12-08 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung primary bronchial epithelial cells
2 GSM37339 PBEC_IL1beta/TNFalpha 12,475 Vrije Universiteit Medisch Centrum 2004-12-08 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung primary bronchial epithelial cells
3 GSM37341 PBEC_PAO1 10,259 Vrije Universiteit Medisch Centrum 2004-12-08 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung primary bronchial epithelial cells
4 GSM45195 Normal Rat Lung 12,855 Shanghai University of Traditional Chinese Medicine 2005-03-12 [SAGE NlaIII] SAGE:10:NlaIII:Rattus norvegicus (GPL23) SAGE Rattus norvegicus
Rattus norvegicus		 lung Lung
5 GSM279945 Acupuncture-treated Normal Rat Lung 12,412 Shanghai University of Traditional Chinese Medicine 2008-04-06 [SAGE NlaIII] SAGE:10:NlaIII:Rattus norvegicus (GPL23) SAGE Rattus norvegicus
Rattus norvegicus		 lung Lung
6 GSM119459 Asthmatic Rat Lung 12,221 Shanghai University of Traditional Chinese Medicine 2006-07-09 [SAGE NlaIII] SAGE:10:NlaIII:Rattus norvegicus (GPL23) SAGE Rattus norvegicus
Rattus norvegicus		 lung Asthmatic Rat Lung
7 GSM279944 Acupuncture-treated Asthmatic Rat Lung 11,656 Shanghai University of Traditional Chinese Medicine 2008-04-06 [SAGE NlaIII] SAGE:10:NlaIII:Rattus norvegicus (GPL23) SAGE Rattus norvegicus
Rattus norvegicus		 lung Lung
8 GSM296377 SAGE_IPF_4 33,985 NHLBI/NIEHS 2008-06-03 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung Lung biopsy
9 GSM296376 SAGE_IPF_3 33,069 NHLBI/NIEHS 2008-06-03 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung Lung biopsy
10 GSM296641 Mouse SAGE lung tissue HMD_9801 32,294 NHLBI/NIEHS 2008-06-04 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 lung Mouse lung tissue
11 GSM296644 SAGE_IPF_1 32,104 NHLBI/NIEHS 2008-06-04 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung Lung biopsy
12 GSM296382 SAGE_IPF_7 31,589 NHLBI/NIEHS 2008-06-03 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung Lung biopsy
13 GSM296385 SAGE_IPF_8 31,184 NHLBI/NIEHS 2008-06-03 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung Lung biopsy
14 GSM296379 SAGE_IPF_5 29,885 NHLBI/NIEHS 2008-06-03 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung Lung biopsy
15 GSM296387 SAGE_IPF_9 29,448 NHLBI/NIEHS 2008-06-03 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung Lung biopsy
16 GSM296381 SAGE_IPF_6 28,720 NHLBI/NIEHS 2008-06-03 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung Lung biopsy
17 GSM296391 SAGE_IPF_10 26,975 NHLBI/NIEHS 2008-06-03 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung Lung biopsy
18 GSM296640 Mouse SAGE lung tissue LMD_9495 24,857 NHLBI/NIEHS 2008-06-04 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 lung Mouse lung tissue
19 GSM296374 SAGE_IPF_2 22,709 NHLBI/NIEHS 2008-06-03 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung Lung biopsy
20 GSM301093 SAGE_NT29 22,409 NHLBI/NIEHS 2008-06-27 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 lung Normal lung
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