Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(1,697)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(507)
  GeneChip
(441,758)
  Tiling Array
(24,730)
  cDNA Array
(109,124)
  Oligo Array
(288,250)
  Bead Array
(148,432)
  Protein Array
(5)
  Antibody
(1,287)
  RT-PCR
(6,509)
  HT-Seq
(64,850)
  Other
(13,899)
  All
(1,101,311)
 
  brain
(348)
  blood
(229)
  connective
(120)
  reproductive
(104)
  muscular
(67)
  digestive
(75)
  liver
(29)
  lung
(108)
  urinary
(44)
  endo/exo-crine
(210)
  embryo
(115)
  adult aerial structure
(23)
  young aerial structure
(1)
  root
(8)
  meristem/growing tissue
(7)
  flower/sexual organ
(3)
  seed/fruit/grain
(3)
  pooled
(95)
  unclassified
(108)
  all
(1,697)
 
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM23443 ZMR Sage 14,850 University of Illinois 2004-05-20 [SAGE NlaIII] SAGE:10:NlaIII:Zea mays (GPL1244) SAGE Zea mays
Zea mays
meristem/growing tissue Root tip well watered
2 GSM1740 Non-embryogenic callus of Medicago truncatula 5,666 Samuel Roberts Noble Foundation 2002-05-29 [SAGE NlaIII] SAGE:10:NlaIII:Medicago truncatula (GPL184) SAGE Medicago truncatula
Medicago truncatula
callus Non-embryogenic callus of Medicago truncatula
3 GSM118239 Shoot winter 2003 18,348 Pastoral Genomics, c/o ViaLactia Biosciences (NZ) Ltd 2006-07-02 [SAGE NlaIII] SAGE:10:NlaIII:Lolium perenne (GPL3969) SAGE Lolium perenne
Lolium perenne
meristem/growing tissue shoot, pre- and post-grazed
4 GSM118238 Shoot autumn 2003 15,631 Pastoral Genomics, c/o ViaLactia Biosciences (NZ) Ltd 2006-07-02 [SAGE NlaIII] SAGE:10:NlaIII:Lolium perenne (GPL3969) SAGE Lolium perenne
Lolium perenne
meristem/growing tissue Shoot autumn 2003
5 GSM118240 Shoot spring 2003 12,139 Pastoral Genomics, c/o ViaLactia Biosciences (NZ) Ltd 2006-07-02 [SAGE NlaIII] SAGE:10:NlaIII:Lolium perenne (GPL3969) SAGE Lolium perenne
Lolium perenne
meristem/growing tissue shoot, pre- and post-grazed
6 GSM118241 Shoot summer 2004 8,341 Pastoral Genomics, c/o ViaLactia Biosciences (NZ) Ltd 2006-07-02 [SAGE NlaIII] SAGE:10:NlaIII:Lolium perenne (GPL3969) SAGE Lolium perenne
Lolium perenne
meristem/growing tissue shoot, pre- and post-grazed
7 GSM414747 tag of rice callus 717,904 Beijing Genomics Institute at Shenzhen 2009-06-08 [SAGE NlaIII] SAGE:17:NlaIII:Oryza sativa (GPL8684) SAGE Oryza sativa
Oryza sativa
callus callus of rice