Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(348)		   blood
(223)		   connective
(120)		   reproductive
(104)		   muscular
(67)		   digestive
(70)		   liver
(29)		   lung
(108)		   urinary
(44)		   endo/exo-crine
(210)		   embryo
(115)		   adult aerial structure
(23)		   young aerial structure
(1)		   root
(8)		   meristem/growing tissue
(7)		   flower/sexual organ
(3)		   seed/fruit/grain
(3)		   pooled
(95)		   unclassified
(105)		   all
(1,683)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM384141 LSAGE_Testis_Embryonal_Carcinoma_CL_hs0212 795,025 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 testis testis, cancer, cell line, long sage, slx-sage, solexa sage, adult, male
2 GSM384146 LSAGE_Uterus_normal_B_hs0195 305,922 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 uterus uterus, normal, bulk, long sage, slx-sage, solexa sage, female
3 GSM384145 LSAGE_Uterus_Normal_B_hs0194 262,005 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 uterus uterus, normal, bulk, long sage, slx-sage, solexa sage, female
4 GSM384142 LSAGE_Testis_Embryonal_Carcinoma_CL_hs0213 194,268 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 testis testis, cancer, cell line, long sage, slx-sage, solexa sage, male, embryonal carcinoma
5 GSM458904 Castration-recurrent; Biological replicate #1 99,730 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 prostate In vivo LNCaP Hollow Fibre model
6 GSM458903 Responsive to androgen-deprivation; Biological replicate #1 96,973 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 prostate In vivo LNCaP Hollow Fibre model
7 GSM458909 Responsive to androgen-deprivation; Biological replicate #3 91,438 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 prostate In vivo LNCaP Hollow Fibre model
8 GSM458910 Castration-recurrent; Biological replicate #3 90,675 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 prostate In vivo LNCaP Hollow Fibre model
9 GSM458907 Castration-recurrent; Biological replicate #2 88,249 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 prostate In vivo LNCaP Hollow Fibre model
10 GSM458906 Responsive to androgen-deprivation; Biological replicate 2 84,499 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 prostate In vivo LNCaP Hollow Fibre model
11 GSM458905 Androgen-sensitive; Biological replicate #2 81,850 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 prostate In vivo LNCaP Hollow Fibre model
12 GSM458908 Androgen-sensitive; Biological replicate #3 79,859 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 prostate In vivo LNCaP Hollow Fibre model
13 GSM458902 Androgen-sensitive; Biological replicate #1 79,201 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 prostate In vivo LNCaP Hollow Fibre model
14 GSM137116 SAGE_uterus_intact female mice 58,565 Laval University 2006-09-21 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 uterus uterus
15 GSM137110 SAGE_prostate_intact male mice 43,520 Laval University 2006-09-21 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 prostate prostate
16 GSM5436 fetal testis somatic cells 42,046 University of Glasgow Veterinary School 2003-04-04 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 testis testes from Wv/Wv mice
17 GSM384405 mSAGE_Testis_normal_somatic_cell_TS26_B_Wv/Wv 42,038 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 testis testis, somatic cell, normal, bulk, short sage, late gestation embryo
18 GSM43229 SAGE_Drosophila 40,823 ENH Research Institute, Northwestern University 2005-02-23 [SAGE NlaIII] SAGE:10:NlaIII:Drosophila melanogaster (GPL1882) SAGE Drosophila melanogaster
Drosophila melanogaster		 testis embryo, embryo with radiation, larvae, pupae, male and female adults, and testis
19 GSM119465 Bombyx ovary SAGE library #1 40,311 The University of Tokyo 2006-07-10 [SAGE NlaIII] SAGE:16:NlaIII:Bombyx mori (GPL3984) SAGE Bombyx mori
Bombyx mori		 ovary ovary (stage1-stage3)
20 GSM106666 mLSAGE_Testis_normal_P84_MMD_SM118 39,467 Canada's Michael Smith Genome Sciences Centre 2006-04-25 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus		 testis Testis, normal
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