Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(1,697)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(507)
  GeneChip
(441,758)
  Tiling Array
(24,730)
  cDNA Array
(109,124)
  Oligo Array
(288,250)
  Bead Array
(148,432)
  Protein Array
(5)
  Antibody
(1,287)
  RT-PCR
(6,509)
  HT-Seq
(64,850)
  Other
(13,899)
  All
(1,101,311)
 
  brain
(348)
  blood
(229)
  connective
(120)
  reproductive
(104)
  muscular
(67)
  digestive
(75)
  liver
(29)
  lung
(108)
  urinary
(44)
  endo/exo-crine
(210)
  embryo
(115)
  adult aerial structure
(23)
  young aerial structure
(1)
  root
(8)
  meristem/growing tissue
(7)
  flower/sexual organ
(3)
  seed/fruit/grain
(3)
  pooled
(95)
  unclassified
(108)
  all
(1,697)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM384040 LSAGE_Bladder_Cancer_B_hs0265 248,532 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
bladder bladder, cancer, bulk, long sage, slx-sage, solexa sage, t4ag3, male
2 GSM384041 LSAGE_Bladder_Cancer_B_hs0266 231,782 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
bladder bladder, cancer, bulk, long sage, slx-sage, solexa sage, tag2, male
3 GSM384037 LSAGE_Bladder_Cancer_B_hs0240 194,853 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
bladder bladder, cancer, bulk, long sage, slx-sage, solexa sage, female, tag2
4 GSM384039 LSAGE_Bladder_Cancer_B_hs0264 180,939 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
bladder bladder, cancer, bulk, long sage, slx-sage, solexa sage, female, t1g3
5 GSM384038 LSAGE_Bladder_Cancer_B_hs0241 170,093 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
bladder bladder, cancer, bulk, long sage, slx-sage, solexa sage, t1g3, female
6 GSM384287 mSAGE_Kidney_normal_P84_MMD_SM104 95,734 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
kidney kidney, normal, microscope dissected, extracted short sage, 84 days post natal
7 GSM384286 mSAGE_Kidney_normal_P0_MMD_SM086 34,048 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
kidney kidney, normal, microscope dissected, ts27, extracted short sage, atlas
8 GSM384164 mSAGE_Bladder_normal_TS22_MMD_SM041 33,606 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
bladder bladder, normal, microscope dissected, extracted short sage, ts22, mid-gestation embryo, atlas
9 GSM384290 mSAGE_Kidney_normal_TS20_MMD_SM124 33,172 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
kidney kidney, kidney mesenchyme, normal, microscope dissected, extracted short sage
10 GSM383897 SAGE_Kidney_carcinoma_B_D2 32,412 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
kidney kidney, bulk, transitional cell carcinoma, female, adult
11 GSM384291 mSAGE_Kidney_normal_TS24_MMD_SM082 31,829 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
kidney kidney, normal, microscope dissected, ts24, late gestation embryo, extracted short sage, atlas
12 GSM384163 mSAGE_Bladder_normal_P84_MMD_SM037 30,928 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
bladder bladder, normal, microscope dissected, adult, extracted short sage, atlas
13 GSM384289 mSAGE_Kidney_normal_TS19_MMD_SM113 27,721 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
kidney kidney, normal, microscope dissected, extracted short sage, mid-gestation embryo, ts19
14 GSM384165 mSAGE_Bladder_normal_TS24_MMD_SM027 23,039 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
bladder bladder, normal, microscope dissected, extracted short sage, late gestation embryo, ts24, atlas
15 GSM384115 LSAGE_Kidney_Glomeruli_Normal_B_bjballer1 22,907 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
kidney kidney, normal, male, adult, long sage, bulk
16 GSM383900 SAGE_Kidney_Glomeruli_Normal_B_bjballer1 20,093 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
kidney kidney, normal, male, adult, short extracted sage, bulk
17 GSM383899 SAGE_Kidney_embryonic_CL_293-control 18,297 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
kidney kidney, normal, cell line, embryo, non-normalized, short SAGE
18 GSM384551 mLSAGE_Kidney_normal_TS14_MMD_SM169 17,690 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) SAGE Mus musculus
Mus musculus
kidney kidney, epithelium, normal, microscope dissected, long sage
19 GSM383901 SAGE_Kidney_normal_B_1 16,295 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
kidney kidney, normal, non-normalized, short SAGE, bulk
20 GSM384288 mSAGE_Kidney_normal_TS14_MMD_SM169 15,843 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
kidney kidney, epithelium, normal, microscope dissected, extracted short sage
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