Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(16,580)		   Tiling Array
(3,529)		   cDNA Array
(5,792)		   Oligo Array
(11,628)		   Bead Array
(2,848)		   Protein Array
(1)		   Antibody
(37)		   RT-PCR
(223)		   HT-Seq
(4,411)		   Other
(158)		   All
(45,516)		  
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 SAGE analysis of mouse brain regions (GSE348) [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) CEA Saclay 2003-03-18 Mus musculus
Mus musculus		 787,990
(157,598 x 5) 		5 by_platform
by_series
2 Transcriptome of a mouse kidney cortical collecting duct cell line: effects of aldosterone and vasopressin (GSE678) [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) CEA Saclay 2003-09-24 Mus musculus
Mus musculus		 472,794
(157,598 x 3) 		3 by_platform
by_series
3 Gene expression profiles in normal and Otx2-/- early gastrulating mouse embryos (GSE683) [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) CEA Saclay 2003-09-25 Mus musculus
Mus musculus		 315,196
(157,598 x 2) 		2 by_platform
by_series
4 SADE analysis of microdissected kidney (GSE694) [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) CEA Saclay 2003-10-01 Homo sapiens
Homo sapiens		 856,792
(107,099 x 8) 		1 7 by_platform
by_series
5 SADE analysis of microdissected kidney (GSE694) [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) CEA Saclay 2003-10-01 Mus musculus
Mus musculus		 157,598
(157,598 x 1) 		1 by_platform
by_series
6 Effect of potassium-depleted diet on kidney (GSE1445) [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) Institut des Cordeliers 2004-05-28 Mus musculus
Mus musculus		 315,196
(157,598 x 2) 		2 by_platform
by_series
7 Transcriptome analysis of monocytic leukemia cell differentiation (GSE1865) [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) Human Genomic Institut 2004-10-22 Homo sapiens
Homo sapiens		 214,198
(107,099 x 2) 		2 by_platform
by_series
8 Human Reticulocyte (GSE1866) [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) Human Genomic Institut 2004-10-22 Homo sapiens
Homo sapiens		 107,099
(107,099 x 1) 		1 by_platform
by_series
9 Genomic alterations in primary hyperaldosteronism (GSE2017) [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) Inserm Institut Cochin 2004-11-26 Homo sapiens
Homo sapiens		 214,198
(107,099 x 2) 		1 1 by_platform
by_series
10 The kidney collecting duct acid-base regulon (GSE4729) [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) Institut des Cordeliers 2006-04-27 Mus musculus
Mus musculus		 315,196
(157,598 x 2) 		2 by_platform
by_series
11 Ovarian gene expression in the absence of FIGLA, an oocyte specific transcription factor (GSE5802) [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) national institutes of health 2006-09-08 Mus musculus
Mus musculus		 157,598
(157,598 x 1) 		1 by_platform
by_series
12 Gene expression in melanocytes and metastases melanoma cells from the pig (GSE5982) [SAGE Sau3A] SAGE:10:Sau3A:Sus scrofa (GPL4262) INRA-ENVA 2006-10-06 Sus scrofa
Sus scrofa domestica		 19,926
(9,963 x 2) 		1 1 by_platform
by_series
13 NB4 cell line untreated and induced to differentiate by a 48h exposure to 1µM ATRA (GSE6587) [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) Institut de Génétique Humaine 2006-12-21 Homo sapiens
Homo sapiens		 214,198
(107,099 x 2) 		2 by_platform
by_series
14 LongSAGE analysis of wild-type mouse brain regions (GSE7593) [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) CEA Saclay 2007-04-24 Mus musculus
Mus musculus		 1,494,696
(213,528 x 7) 		7 by_platform
by_series
15 SAGE analysis of wild-type mouse brain regions (GSE7594) [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) CEA Saclay 2007-04-24 Mus musculus
Mus musculus		 787,990
(157,598 x 5) 		5 by_platform
by_series
16 Atlas of gene expression in the mouse kidney (GSE25223) [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) Institut des Cordeliers 2010-11-09 Mus musculus
Mus musculus		 2,135,280
(213,528 x 10) 		10 by_platform
by_series
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