Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(391,468)		   Tiling Array
(22,222)		   cDNA Array
(104,397)		   Oligo Array
(247,270)		   Bead Array
(112,023)		   Protein Array
(5)		   Antibody
(1,160)		   RT-PCR
(4,486)		   HT-Seq
(39,106)		   Other
(7,515)		   All
(931,947)		  
  brain
(18)		   blood
(5)		   connective
(2)		   reproductive
(1)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(1)		   urinary
(24)		   endo/exo-crine
(0)		   embryo
(2)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(1)		   unclassified
(0)		   all
(54)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM32700 Purified blood reticulocytes 268 Human Genomic Institut 2004-10-20 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 peripheral blood Blood reticulocytes from ten healthy adult
2 GSM134581 Pig melanocyte cell line PigMel 5,466 INRA-ENVA 2006-09-05 [SAGE Sau3A] SAGE:10:Sau3A:Sus scrofa (GPL4262) SAGE Sus scrofa
Sus scrofa domestica		 skin PigMel P37, normal melanocyte cell line derived from pig skin
3 GSM10430 Whole kidney 5,661 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 kidney adult (8-10 weeks old) mouse kidneys
4 GSM136779 Pig melanoma cells from lung metastasis 6,131 INRA-ENVA 2006-09-19 [SAGE Sau3A] SAGE:10:Sau3A:Sus scrofa (GPL4262) SAGE Sus scrofa
Sus scrofa domestica		 lung Primary culture of melanoma cells from a lung metastasis in MeLiM minipigs
5 GSM151622 NB4 cell line induced to differentiate by a 48h exposure to 1µM ATRA 6,218 Institut de Génétique Humaine 2006-12-15 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 bone marrow NB4 cell line (Acute Promyelocytic Leukemia model) expposed to 1µM ATRA for 48hours
6 GSM151619 NB4 cell line untreated 6,776 Institut de Génétique Humaine 2006-12-15 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 bone marrow NB4 cell line (Acute Promyelocytic Leukemia model)
7 GSM32699 U937 differentiated cells 7,151 Human Genomic Institut 2004-10-19 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 lymphnode U937 cell line
8 GSM10394 6.5 dpc embryo, Otx2 -/- 8,847 CEA Saclay 2003-09-22 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 embryo Otx2 -/- 6.5 dpc embryos of either sex
9 GSM106343 acidotic mouse OMCD 8,847 Institut des Cordeliers 2006-04-24 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 kidney microdissected outer medullary collecting duct
10 GSM32698 U937 cell line untreated 8,913 Human Genomic Institut 2004-10-19 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 lymphnode U937 cell line
11 GSM23474 Kidney outer medullary collecting duct 9,833 Institut des Cordeliers 2004-05-21 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 kidney microdissected outer medullary collecting duct
12 GSM4873 Lateral striatum 10,491 CEA Saclay 2003-03-17 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Control mouse lateral striatum
13 GSM23478 Kidney outer medullary collecting duct: Control 10,521 Institut des Cordeliers 2004-05-21 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 kidney microdissected outer medullary collecting duct
14 GSM4874 Medial striatum 10,804 CEA Saclay 2003-03-17 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Control mouse medial striatum
15 GSM4876 Somatosensory cortex 10,840 CEA Saclay 2003-03-17 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Control mouse somatosensory cortex
16 GSM619298 Kidney Glomerulus 11,110 Institut des Cordeliers 2010-11-09 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 kidney microdissected glomeruli from kidney
17 GSM10393 6.5 dpc embryo, wild type 11,209 CEA Saclay 2003-09-22 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 embryo wild type 6.5 dpc embryos from either sex
18 GSM4875 Nucleus accumbens 11,433 CEA Saclay 2003-03-17 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Control mouse nucleus accumbens
19 GSM4871 Whole brain 12,323 CEA Saclay 2003-03-17 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Control mouse whole brain
20 GSM619305 Kidney Proximal Tubule, S3 12,524 Institut des Cordeliers 2010-11-09 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 kidney microdissected proximal tubule, S3 from kidney
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