Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(18)		   blood
(5)		   connective
(2)		   reproductive
(1)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(1)		   urinary
(24)		   endo/exo-crine
(0)		   embryo
(2)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(1)		   unclassified
(0)		   all
(54)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM10394 6.5 dpc embryo, Otx2 -/- 8,847 CEA Saclay 2003-09-22 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 embryo Otx2 -/- 6.5 dpc embryos of either sex
2 GSM10393 6.5 dpc embryo, wild type 11,209 CEA Saclay 2003-09-22 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 embryo wild type 6.5 dpc embryos from either sex
3 GSM106343 acidotic mouse OMCD 8,847 Institut des Cordeliers 2006-04-24 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 kidney microdissected outer medullary collecting duct
4 GSM36126 Aldosterone Producing Adenoma 13,386 Inserm Institut Cochin 2004-11-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 pooled Adrenocortical adenoma producing aldosterone. Preoperative diagnosis of primary aldosteronism with increased aldosterone, increased aldosterone to renin ratio, lateralisation of aldosterone to cortisol ratio on adrenal venous sampling. Histology: 10 mm, unique adenoma with no adjacent hyperplasia Keywords = adrenocortical adenoma aldosterone
5 GSM183649 Caudate-putamen 25,114 CEA Saclay 2007-04-24 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Wild-type mouse caudate-putamen
6 GSM183639 Cingulate cortex 54,338 CEA Saclay 2007-04-24 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 cerebrum Wild-type mouse cingulate cortex
7 GSM183640 Entorhinal cortex 53,354 CEA Saclay 2007-04-24 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Wild-type mouse entorhinal cortex
8 GSM620799 Kidney Connecting Tubule (CNT) 16,202 Institut des Cordeliers 2010-11-09 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 kidney microdissected connecting tubule from kidney
9 GSM10428 Kidney cortical collecting duct 22,657 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 kidney microdissected cortical collecting ducts
10 GSM620800 Kidney Cortical Collecting Duct 17,588 Institut des Cordeliers 2010-11-09 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 kidney microdissected cortical collecting duct from kidney
11 GSM10426 Kidney cortical thick ascending limb 20,018 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 cerebrum microdissected cortical thick ascending limbs
12 GSM620794 Kidney cortical Thick Ascending Limb of Henle's Loop (CTAL) 17,889 Institut des Cordeliers 2010-11-09 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 kidney microdissected cortical thick ascending limb of Henle's loop (CTAL) from kidney
13 GSM10427 Kidney distal convoluted tubule 21,390 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 kidney Kidney distal convoluted tubule
14 GSM620798 Kidney Distal Convoluted Tubule 15,115 Institut des Cordeliers 2010-11-09 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 kidney microdissected distal convoluted tubule from kidney
15 GSM10419 Kidney glomerulus 20,525 CEA Saclay 2003-09-23 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 kidney Kidney glomerulus
16 GSM619298 Kidney Glomerulus 11,110 Institut des Cordeliers 2010-11-09 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 kidney microdissected glomeruli from kidney
17 GSM10425 Kidney medullary thick ascending limb 19,333 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 kidney Kidney medullary thick ascending limb
18 GSM619306 Kidney Medullary Thick Ascending Limb of Henle's Loop (MTAL) 17,663 Institut des Cordeliers 2010-11-09 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 kidney microdissected medullary thick ascending limb of Henle's loop from kidney
19 GSM620801 Kidney Outer Medullary Collecting Duct 19,124 Institut des Cordeliers 2010-11-09 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 kidney microdissected outer medullary Collecting Duct from kidney
20 GSM23474 Kidney outer medullary collecting duct 9,833 Institut des Cordeliers 2004-05-21 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 kidney microdissected outer medullary collecting duct
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