Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(18)		   blood
(5)		   connective
(2)		   reproductive
(1)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(1)		   urinary
(24)		   endo/exo-crine
(0)		   embryo
(2)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(1)		   unclassified
(0)		   all
(54)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM36127 Zona Glomerulosa (adjacent to an APA) 13,386 Inserm Institut Cochin 2004-11-24 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 adipos Microdissected zona glomerulosa adjacent to an aldosterone producing adenoma Preoperative diagnosis of primary hyperaldosteronism by increased aldosterone, increased aldosterone to renin ratio, lateralisation of the aldosterone to cortisol ratio after adrenal venous sampling. Histological confirmation of a unique 10 mm adenoma; no hyperplasia of the adjacent zona glomerulosa. Microdissection on fresh tissue with a forceps after fat cleansing: the glomerulosa comes with the adrenal capsule. Keywords = adrenocortical adenoma aldosterone
2 GSM10430 Whole kidney 5,661 CEA Saclay 2003-09-24 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 kidney adult (8-10 weeks old) mouse kidneys
3 GSM183648 Whole brain 61,509 CEA Saclay 2007-04-24 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 cerebrum Wild-type mouse whole brain
4 GSM4871 Whole brain 12,323 CEA Saclay 2003-03-17 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Control mouse whole brain
5 GSM183653 Ventral tegmental area 32,397 CEA Saclay 2007-04-24 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 cerebrum Wild-type mouse ventral tegmental area
6 GSM32699 U937 differentiated cells 7,151 Human Genomic Institut 2004-10-19 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 lymphnode U937 cell line
7 GSM32698 U937 cell line untreated 8,913 Human Genomic Institut 2004-10-19 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 lymphnode U937 cell line
8 GSM183651 Thalamus 24,402 CEA Saclay 2007-04-24 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Wild-type mouse thalamus
9 GSM183652 Substantia nigra 30,394 CEA Saclay 2007-04-24 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 cerebrum Wild-type mouse substantia nigra
10 GSM183647 Somatosensory cortex 25,416 CEA Saclay 2007-04-24 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Wild-type mouse somatosensory cortex
11 GSM4876 Somatosensory cortex 10,840 CEA Saclay 2003-03-17 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Control mouse somatosensory cortex
12 GSM32700 Purified blood reticulocytes 268 Human Genomic Institut 2004-10-20 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 peripheral blood Blood reticulocytes from ten healthy adult
13 GSM183650 Prelimbic cortex 27,590 CEA Saclay 2007-04-24 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 cerebrum Wild-type mouse prelimbic cortex
14 GSM136779 Pig melanoma cells from lung metastasis 6,131 INRA-ENVA 2006-09-19 [SAGE Sau3A] SAGE:10:Sau3A:Sus scrofa (GPL4262) SAGE Sus scrofa
Sus scrofa domestica		 lung Primary culture of melanoma cells from a lung metastasis in MeLiM minipigs
15 GSM134581 Pig melanocyte cell line PigMel 5,466 INRA-ENVA 2006-09-05 [SAGE Sau3A] SAGE:10:Sau3A:Sus scrofa (GPL4262) SAGE Sus scrofa
Sus scrofa domestica		 skin PigMel P37, normal melanocyte cell line derived from pig skin
16 GSM134557 ovarian gene expression innthe absence of FIGLA, an oocyte specific transcription factor 47,961 national institutes of health 2006-09-02 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 ovary normal Versus FIGLA null ovary at new born developmental stage
17 GSM183646 Orbital cortex 30,885 CEA Saclay 2007-04-24 [SAGE Sau3A] SAGE:15:Sau3A:Mus musculus (GPL5119) SAGE Mus musculus
Mus musculus		 cerebrum Wild-type mouse orbital cortex
18 GSM183644 Nucleus accumbens 29,279 CEA Saclay 2007-04-24 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Wild-type mouse nucleus accumbens
19 GSM4875 Nucleus accumbens 11,433 CEA Saclay 2003-03-17 [SAGE Sau3A] SAGE:10:Sau3A:Mus musculus (GPL275) SAGE Mus musculus
Mus musculus		 cerebrum Control mouse nucleus accumbens
20 GSM151619 NB4 cell line untreated 6,776 Institut de Génétique Humaine 2006-12-15 [SAGE Sau3A] SAGE:10:Sau3A:Homo sapiens (GPL6) SAGE Homo sapiens
Homo sapiens		 bone marrow NB4 cell line (Acute Promyelocytic Leukemia model)
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