Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(439)
  Primates
(2)
  Rodents
(190)
  Mammals
(12)
  Vertebrates
(10)
  Invertebrates
(58)
  Plants
(80)
  Bacteria
(82)
  Viruses
(1)
  Phages
(0)
  Unclassified
(1)
  All
(875)
 
  SAGE NlaIII
(3)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(261)
  Tiling Array
(19)
  cDNA Array
(487)
  Oligo Array
(103)
  Bead Array
(1)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(1)
  HT-Seq
(0)
  Other
(0)
  All
(875)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Role of transcriptional co-repressor proteins Ssn6, Tup11 and Tup12 (GSE4566) [Tiling Array] Affymetrix Schizosaccharomyces pombe 23K Tiling Array (GPL2862) Karolinska Institute 2006-03-28 Schizosaccharomyces pombe
Schizosaccharomyces pombe
69,183
(23,061 x 3)
3 by_platform
by_series
2 A role for TFIIIC transcription factor complex in genome organization (GSE4555) [Tiling Array] NCI Pombe 44K v1.0 (GPL2558) NCI 2006-03-27 Schizosaccharomyces pombe
Schizosaccharomyces pombe
174,272
(43,568 x 4)
4 by_platform
by_series
3 DNaseI/Array GM06990 (GSE4334) [Tiling Array] Nimblegen ENCODE Array (GPL2131) University of Washington 2006-03-03 Homo sapiens
Homo sapiens
382,884
(382,884 x 1)
1 by_platform
by_series
4 E2F1 binding sites in MCF7 cells ENCODE (GSE4355) [Tiling Array] ENCODE NimbleGen hg17_04252005 tiling array (GPL3514) UCDavis 2006-03-06 Homo sapiens
Homo sapiens
385,149
(385,149 x 1)
1 by_platform
by_series
5 Characterization of E2F1 in HeLa and MCF7 cells (GSE4415) [Tiling Array] ENCODE NimbleGen hg17_04252005 tiling array (GPL3514) UCDavis 2006-03-08 Homo sapiens
Homo sapiens
385,149
(385,149 x 1)
1 by_platform
by_series
6 E2F1 binding sites in MCF7 cells ENCODE (GSE4355) [Tiling Array] ENCODE NimbleGen hg16 tiling array (GPL3508) UCDavis 2006-03-06 Homo sapiens
Homo sapiens
765,768
(382,884 x 2)
2 by_platform
by_series
7 Characterization of E2F1 in HeLa and MCF7 cells (GSE4415) [Tiling Array] ENCODE NimbleGen hg16 tiling array (GPL3508) UCDavis 2006-03-08 Homo sapiens
Homo sapiens
765,768
(382,884 x 2)
2 by_platform
by_series
8 Genome-wide profiling of PRC1 and PRC2 Polycomb chromatin binding in Drosophila (GSE4564) [Tiling Array] Tiling design for D. melanogaster (GPL2678) NKI-AVL 2006-03-28 Drosophila melanogaster
Drosophila melanogaster
781,838
(390,919 x 2)
2 by_platform
by_series
9 Histone turnover mediates epigenetic processes in Drosophila S2 cells (GSE4091) [Tiling Array] FHCRC DMEL 4.2 Tiling 1 of 3 (GPL3352) Fred Hutchinson Cancer Research Center 2006-01-24 Drosophila melanogaster
Drosophila melanogaster
782,030
(391,015 x 2)
2 by_platform
by_series
10 Histone turnover mediates epigenetic processes in Drosophila S2 cells (GSE4091) [Tiling Array] FHCRC DMEL 4.2 Tiling 2 of 3 (GPL3353) Fred Hutchinson Cancer Research Center 2006-01-24 Drosophila melanogaster
Drosophila melanogaster
782,030
(391,015 x 2)
2 by_platform
by_series
11 Histone turnover mediates epigenetic processes in Drosophila S2 cells (GSE4091) [Tiling Array] FHCRC DMEL 4.2 Tiling 3 of 3 (GPL3354) Fred Hutchinson Cancer Research Center 2006-01-24 Drosophila melanogaster
Drosophila melanogaster
782,034
(391,017 x 2)
2 by_platform
by_series
12 HeLa E2F1 ChIP-chip experiments (GSE4306) [Tiling Array] ENCODE NimbleGen hg17 tiling array (GPL3489) UCDavis 2006-02-24 Homo sapiens
Homo sapiens
1,148,139
(382,713 x 3)
3 by_platform
by_series
13 Characterization of E2F1 in HeLa and MCF7 cells (GSE4415) [Tiling Array] ENCODE NimbleGen hg17 tiling array (GPL3489) UCDavis 2006-03-08 Homo sapiens
Homo sapiens
1,148,139
(382,713 x 3)
3 by_platform
by_series
14 POLII localization in HeLa cells (GSE4337) [Tiling Array] ENCODE NimbleGen hg16 tiling array (GPL3508) UCDavis 2006-03-03 Homo sapiens
Homo sapiens
1,148,652
(382,884 x 3)
3 by_platform
by_series
15 IgG control ChIP in HeLa cells (GSE4338) [Tiling Array] ENCODE NimbleGen hg16 tiling array (GPL3508) UCDavis 2006-03-03 Homo sapiens
Homo sapiens
1,148,652
(382,884 x 3)
3 by_platform
by_series
16 MYC binding sites in HeLa cells (GSE4354) [Tiling Array] ENCODE NimbleGen hg17_04252005 tiling array (GPL3514) UCDavis 2006-03-06 Homo sapiens
Homo sapiens
1,155,447
(385,149 x 3)
3 by_platform
by_series
17 High resolution analysis of early lobular neoplastic breast lesions (ALH and LCIS) by whole genome tiling path array CGH (GSE4591) [Tiling Array] BCCRC Lam SMRTr array (GPL2616) Samuel Lunenfeld Research Institute 2006-03-31 Homo sapiens
Homo sapiens
1,346,400
(53,856 x 25)
25 by_platform
by_series
18 A comparison of high density oligonucleotide and PCR-based array platforms for chIP chip in yeast (GSE4450) [Tiling Array] Snyder - Nimblegen S.cerevisiae WGT 50-60; 50-120 (GPL3541) The Australian Wine Research Institute 2006-03-13 Saccharomyces cerevisiae
Saccharomyces cerevisiae
2,735,289
(303,921 x 9)
9 by_platform
by_series
19 Global Identification of Noncoding RNAs in S. cerevisiae (GSE4275) [Tiling Array] NASA Ames Research Center yeast 360K whole genome tiling (GPL3471) NASA Ames Research Center 2006-02-20 Saccharomyces cerevisiae
Saccharomyces cerevisiae
3,125,144
(390,643 x 8)
8 by_platform
by_series