Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(228)
  SAGE RsaI
(1)
  SAGE Sau3A
(16)
  MPSS
(67)
  GeneChip
(19,582)
  Tiling Array
(4,015)
  cDNA Array
(5,993)
  Oligo Array
(14,254)
  Bead Array
(4,043)
  Protein Array
(1)
  Antibody
(43)
  RT-PCR
(338)
  HT-Seq
(7,682)
  Other
(247)
  All
(56,529)
 
1   |   2   |   3   |   4   |   5      »      [201]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 CGH: NAM parent lines vs. Wm82-ISU-01 (GSE56351) [Tiling Array] Soybean 1.4 Million CGH microarray (GPL18500) University of Minnesota 2014-03-29 Glycine max
Glycine max
58,976,736
(1,404,208 x 42)
42 by_platform
by_series
2 HDACs act on ribosomal DNA to control the yeast replication program and the competition between origins for limiting initiation factors (GSE56171) [Tiling Array] [Sc03b_MR] Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array (GPL7250) Institute of Human Genetics - CNRS 2014-03-25 Saccharomyces cerevisiae W303
Saccharomyces cerevisiae W303
38
(0 x 38)
38 by_platform
by_series
3 Microarray-based ultra-high resolution discovery of genomic deletion mutations (GSE55327) [Tiling Array] NimbleGen Arabidopsis CGH 3 x 720 K whole genome custom tiling array [090325_Athal_EB_CGH_HX1] (GPL18327) Oxford University 2014-02-25 Arabidopsis thaliana
Arabidopsis thaliana
5
(0 x 5)
5 by_platform
by_series
4 Analysis of the iron stimulon and fur regulon of Geobacter sulfurreducens (GSE54306) [Tiling Array] UCSD Nimblegen Geobacter sulfurreducens 381K Tiling Array 2007 (Probe) (GPL9112) University of California, San Diego 2014-01-22 Geobacter sulfurreducens PCA
Geobacter sulfurreducens PCA
6,098,784
(381,174 x 16)
16 by_platform
by_series
5 Analysis of the iron stimulon and fur regulon of Geobacter sulfurreducens [expression] (GSE54304) [Tiling Array] UCSD Nimblegen Geobacter sulfurreducens 381K Tiling Array 2007 (Probe) (GPL9112) University of California, San Diego 2014-01-22 Geobacter sulfurreducens PCA
Geobacter sulfurreducens PCA
3,430,566
(381,174 x 9)
9 by_platform
by_series
6 Analysis of the iron stimulon and fur regulon of Geobacter sulfurreducens [ChIP-chip] (GSE54305) [Tiling Array] UCSD Nimblegen Geobacter sulfurreducens 381K Tiling Array 2007 (Probe) (GPL9112) University of California, San Diego 2014-01-22 Geobacter sulfurreducens PCA
Geobacter sulfurreducens PCA
2,668,218
(381,174 x 7)
7 by_platform
by_series
7 RNAi mediates post-transcriptional repression of gene expression in fission yeast Schizosaccharomyces pombe [Affymetrix] (GSE54190) [Tiling Array] [Sp20b_M] Affymetrix S. pombe Tiling 1.0FR Array (GPL7715) Karolinska Institute 2014-01-17 Schizosaccharomyces pombe 972h-
Schizosaccharomyces pombe 972h-
9
(0 x 9)
9 by_platform
by_series
8 RNAi mediates post-transcriptional repression of gene expression in fission yeast Schizosaccharomyces pombe (GSE54195) [Tiling Array] [Sp20b_M] Affymetrix S. pombe Tiling 1.0FR Array (GPL7715) Karolinska Institute 2014-01-17 Schizosaccharomyces pombe 972h-
Schizosaccharomyces pombe 972h-
9
(0 x 9)
9 by_platform
by_series
9 The Hox gene Abd-B controls stem cell niche function in the Drosophila testis (GSE53709) [Tiling Array] [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array (GPL6629) COS, University of Heidelberg 2013-12-30 Drosophila melanogaster
Drosophila melanogaster
4
(0 x 4)
4 by_platform
by_series
10 RNA expression data from Halobacterium NRC-1 in varied extracellular salinity conditions (GSE53544) [Tiling Array] Agilent-032722 Halobacterium sp. NRC-1 Tiling V2 030521 (GPL17005) Institute for Systems Biology 2013-12-20 Halobacterium sp. NRC-1
Halobacterium sp. NRC-1
1,230,660
(61,533 x 20)
20 by_platform
by_series
11 NeuCode metabolic labeling reveals a high correlation between mRNA and protein abundance during salt adaptation in S. cerevisiae. (GSE53549) [Tiling Array] NimbleGen UW-Madison Saccharomyces cerevisiae 380K tiling array [2006-10-12_Ansari_tiling_51mer; gene-level version] (GPL15778) University of Wisconsin-Madison 2013-12-20 Saccharomyces cerevisiae
Saccharomyces cerevisiae
13,758
(6,879 x 2)
2 by_platform
by_series
12 Gene expression analysis of Pseudomonas putida KT2440 Wild Type and its exopolysaccharide mutants under water stress (GSE53407) [Tiling Array] NimbleGen Pseudomonas putida KT2440 12x135k  (GPL18079) Technical University of Denmark 2013-12-17 Pseudomonas putida KT2440
Pseudomonas putida KT2440
130,608
(5,442 x 24)
24 by_platform
by_series
13 Long term demasculinization of X-linked intergenic noncoding RNAs in Drosophila melanogaster (GSE53421) [Tiling Array] [Dm35b_MF] Affymetrix Drosophila Tiling 1.0F Array (GPL11397) Universidade de Sao Paolo 2013-12-17 Drosophila melanogaster
Drosophila melanogaster
9
(0 x 9)
2 2 2 3 by_platform
by_series
14 Cooperative function of the three different kinds of nucleoid-associated proteins encoded on the IncP-7 plasmid pCAR1 [KT2440 chromosome chip] (GSE53067) [Tiling Array] [KT2440b520511F] Pseudomonas putida KT2440 chromosome Array (GPL8296) The University of Tokyo 2013-12-06 Pseudomonas putida
Pseudomonas putida
6
(0 x 6)
6 by_platform
by_series
15 Cooperative function of the three different kinds of nucleoid-associated proteins encoded on the IncP-7 plasmid pCAR1 [pCAR1 plasmid chip] (GSE53068) [Tiling Array] [pCAR1_8b520435F] Affymetrix CustomExpress IncP-7 plasmid pCAR1 Tiling Array (GPL6591) The University of Tokyo 2013-12-06 Pseudomonas putida
Pseudomonas putida
6
(0 x 6)
6 by_platform
by_series
16 Cooperative function of the three different kinds of nucleoid-associated proteins encoded on the IncP-7 plasmid pCAR1 (GSE53069) [Tiling Array] [KT2440b520511F] Pseudomonas putida KT2440 chromosome Array (GPL8296) The University of Tokyo 2013-12-06 Pseudomonas putida
Pseudomonas putida
6
(0 x 6)
6 by_platform
by_series
17 Cooperative function of the three different kinds of nucleoid-associated proteins encoded on the IncP-7 plasmid pCAR1 (GSE53069) [Tiling Array] [pCAR1_8b520435F] Affymetrix CustomExpress IncP-7 plasmid pCAR1 Tiling Array (GPL6591) The University of Tokyo 2013-12-06 Pseudomonas putida
Pseudomonas putida
6
(0 x 6)
6 by_platform
by_series
18 DamID profiling of proneural transcription factor binding in Drosophila melanogaster wing imaginal discs (GSE53009) [Tiling Array] NimbleGen Drosophila Tiling 388k Array [2007-02-15_Dros_300bp_60mer] (GPL18027) Institut Pasteur 2013-12-05 Drosophila melanogaster
Drosophila melanogaster
4,620,000
(385,000 x 12)
12 by_platform
by_series
19 Conditional DamID and Transcriptome studies during sensory organ development in Drosophila (GSE53011) [Tiling Array] NimbleGen Drosophila Tiling 388k Array [2007-02-15_Dros_300bp_60mer] (GPL18027) Institut Pasteur 2013-12-05 Drosophila melanogaster
Drosophila melanogaster
4,620,000
(385,000 x 12)
12 by_platform
by_series
20 Methylation profiling of the human CNTNAP2 gene in brain using high-resolution tiling arrays. (GSE52948) [Tiling Array] human CNTNAP2 tiling array (GPL18021) University Hospital Wuerzburg 2013-12-03 Homo sapiens
Homo sapiens
803,478
(133,913 x 6)
6 by_platform
by_series
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