Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,625)		   Primates
(206)		   Rodents
(12,612)		   Mammals
(782)		   Vertebrates
(1,156)		   Invertebrates
(4,045)		   Plants
(6,642)		   Bacteria
(2,980)		   Viruses
(50)		   Phages
(4)		   Unclassified
(287)		   All
(47,440)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(17,192)		   Tiling Array
(3,579)		   cDNA Array
(5,850)		   Oligo Array
(12,094)		   Bead Array
(3,016)		   Protein Array
(1)		   Antibody
(39)		   RT-PCR
(246)		   HT-Seq
(4,931)		   Other
(183)		   All
(47,440)		  
1   |   2   |   3   |   4   |   5      »      [179]
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Binding data for nine transcription factors for S. cerevisiae salt response (GSE15639) [Tiling Array] Snyder - Nimblegen S.cerevisiae WGT 50-60; 50-120 (GPL3541) Yale University 2009-04-10 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 18,235,260
(303,921 x 60) 		60 by_platform
by_series
2 ENCODE transcript mapping for human placental poly(A)+ RNA and human NB4 cell line total RNA (GSE2720) [Tiling Array] Human 36mer ENCODE region oligonucleotide tiling array (Yale design #1) (GPL2105) Yale University 2005-05-28 Homo sapiens
Homo sapiens		 8,150,919
(388,139 x 21) 		6 15 by_platform
by_series
3 ENCODE Transcript Mapping for Total RNA from Human NB4 Cells untreated, treated with RA, and treated with TPA (GSE2679) [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) Yale University 2005-05-18 Homo sapiens
Homo sapiens		 8,114,480
(737,680 x 11) 		11 by_platform
by_series
4 ENCODE Transcript Mapping for Human Neutrophil (PMN) Total RNA (GSE2678) [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) Yale University 2005-05-18 Homo sapiens
Homo sapiens		 7,376,800
(737,680 x 10) 		10 by_platform
by_series
5 ENCODE Transcript Mapping for Human Placental Poly(A)+ RNA (GSE2671) [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBIv34 (GPL1789) Yale University 2005-05-17 Homo sapiens
Homo sapiens		 2,213,040
(737,680 x 3) 		3 by_platform
by_series
6 A methodology for the estimation of DNA methylation levels based on microarray derived MeDIP-enrichment (GSE12096) [Tiling Array] Nimblegen custom chromosome X tiling array (GPL7047) Yale University 2008-07-11 Homo sapiens
Homo sapiens		 2,101,008
(350,168 x 6) 		4 2 by_platform
by_series
7 ENCODE ChIP-chip for STAT1 on Human Hela S3 Cells (GSE2714) [Tiling Array] Nimblegen ENCODE Array (GPL2131) Yale University 2005-05-26 Homo sapiens
Homo sapiens		 1,914,420
(382,884 x 5) 		5 by_platform
by_series
8 ENCODE ChIP-chip for BAF155 on Human Hela S3 Cells (GSE3549) [Tiling Array] Nimblegen ENCODE Array (GPL2131) Yale University 2005-11-02 Homo sapiens
Homo sapiens		 1,531,536
(382,884 x 4) 		4 by_platform
by_series
9 ENCODE ChIP-chip for BAF170 on Human Hela S3 Cells (GSE3550) [Tiling Array] Nimblegen ENCODE Array (GPL2131) Yale University 2005-11-02 Homo sapiens
Homo sapiens		 1,531,536
(382,884 x 4) 		4 by_platform
by_series
10 Tiling microarray analysis of japonica and indica rice chromosome 10 (GSE2500) [Tiling Array] Tiling microarray analysis of rice japonica chromosome 10(forward strand) (GPL1933) Yale University 2005-04-06 Oryza sativa
Oryza sativa		 1,500,560
(375,140 x 4) 		2 2 by_platform
by_series
11 ENCODE ChIP-chip for JUN on Human Hela S3 Cells (GSE3448) [Tiling Array] Nimblegen ENCODE Array (GPL2131) Yale University 2005-10-14 Homo sapiens
Homo sapiens		 1,148,652
(382,884 x 3) 		3 by_platform
by_series
12 ENCODE ChIP-chip for FOS on Human Hela S3 Cells (GSE3449) [Tiling Array] Nimblegen ENCODE Array (GPL2131) Yale University 2005-10-14 Homo sapiens
Homo sapiens		 1,148,652
(382,884 x 3) 		3 by_platform
by_series
13 Analysis of transcription factor HY5 genomic binding sites in Arabidopsis (GSE6510) [Tiling Array] Arabidopsis whole genome tiling array ver1.0 (GPL4656) Yale University 2006-12-12 Arabidopsis thaliana
Arabidopsis thaliana		 776,068
(194,017 x 4) 		4 by_platform
by_series
14 ENCODE ChIP-chip for TAF II p250 on Human Hela S3 Cells (GSE3450) [Tiling Array] Nimblegen ENCODE Array (GPL2131) Yale University 2005-10-14 Homo sapiens
Homo sapiens		 765,768
(382,884 x 2) 		2 by_platform
by_series
15 ENCODE ChIP-chip for STAT1 on Human Hela S3 Cells (GSE2714) [Tiling Array] Maskless Photolithographic 36mer ENCODE Array (FWD) (GPL2133) Yale University 2005-05-26 Homo sapiens
Homo sapiens		 764,906
(382,453 x 2) 		2 by_platform
by_series
16 ENCODE ChIP-chip for STAT1 on Human Hela S3 Cells (GSE2714) [Tiling Array] Maskless Photolithographic 50mer ENCODE Array (FWD) (GPL2132) Yale University 2005-05-26 Homo sapiens
Homo sapiens		 576,117
(192,039 x 3) 		3 by_platform
by_series
17 Maskless photolithography genome tiling experiment (GSE1904) [Tiling Array] Human 36mer genome tiling array HS_12794 (GPL1549) Yale University 2004-10-29 Homo sapiens
Homo sapiens		 389,668
(389,668 x 1) 		1 by_platform
by_series
18 Maskless photolithography genome tiling experiment (GSE1904) [Tiling Array] Human 36mer genome tiling array HS_12802 (GPL1551) Yale University 2004-10-29 Homo sapiens
Homo sapiens		 389,668
(389,668 x 1) 		1 by_platform
by_series
19 Maskless photolithography genome tiling experiment (GSE1904) [Tiling Array] Human 36mer genome tiling array HS_12803 (GPL1552) Yale University 2004-10-29 Homo sapiens
Homo sapiens		 389,668
(389,668 x 1) 		1 by_platform
by_series
20 Maskless photolithography genome tiling experiment (GSE1904) [Tiling Array] Human 36mer genome tiling array HS_13051 (GPL1563) Yale University 2004-10-29 Homo sapiens
Homo sapiens		 389,668
(389,668 x 1) 		1 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [179]
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