Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(1,697)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(507)
  GeneChip
(441,758)
  Tiling Array
(24,730)
  cDNA Array
(109,124)
  Oligo Array
(288,250)
  Bead Array
(148,432)
  Protein Array
(5)
  Antibody
(1,287)
  RT-PCR
(6,509)
  HT-Seq
(64,850)
  Other
(13,899)
  All
(1,101,311)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(111)
  meristem/growing tissue
(45)
  flower/sexual organ
(116)
  seed/fruit/grain
(119)
  pooled
(0)
  unclassified
(0)
  all
(24,730)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM999243 GM12878 PABPC1 RIP RNA 0 UAlbany CNSE 2012-09-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBI build 35 (GPL3111) RNA Homo sapiens
Homo sapiens
unclassified source_name:GM12878 PABP RIP RNA title:GM12878 PABPC1 RIP RNA description:GM12878 PABP RIP RNA Rep 1-3
2 GSM999242 GM12878 ELAVL1 RIP RNA 0 UAlbany CNSE 2012-09-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBI build 35 (GPL3111) RNA Homo sapiens
Homo sapiens
unclassified source_name:GM12878 ELAVL1 RIP RNA title:GM12878 ELAVL1 RIP RNA description:GM12878 ELAVL1 RIP RNA Rep 1-3
3 GSM999241 GM12878 Negative Control RNA 0 UAlbany CNSE 2012-09-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBI build 35 (GPL3111) RNA Homo sapiens
Homo sapiens
unclassified source_name:GM12878 T7 control RIP RNA title:GM12878 Negative Control RNA description:GM12878 T7 RIP RNA Rep 1-3
4 GSM999240 GM12878 Input(Total) RNA 0 UAlbany CNSE 2012-09-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBI build 35 (GPL3111) RNA Homo sapiens
Homo sapiens
unclassified source_name:GM12878 RIP input RNA (total) title:GM12878 Input(Total) RNA description:GM12878 input RNA Rep 1-3
5 GSM999239 K562 PABPC1 RIP RNA 0 UAlbany CNSE 2012-09-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBI build 35 (GPL3111) RNA Homo sapiens
Homo sapiens
bone marrow K562 PABP RIP RNA
6 GSM999238 K562 ELAVL1 RIP RNA 0 UAlbany CNSE 2012-09-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBI build 35 (GPL3111) RNA Homo sapiens
Homo sapiens
bone marrow K562 ELAVL1 RIP RNA
7 GSM999237 K562 Negative Control RNA 0 UAlbany CNSE 2012-09-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBI build 35 (GPL3111) RNA Homo sapiens
Homo sapiens
bone marrow K562 T7 control RIP RNA
8 GSM999236 K562 Input(Total) RNA 0 UAlbany CNSE 2012-09-07 [Tiling Array] Affymetrix ENCODE Tiling Array - ANTISENSE - NCBI build 35 (GPL3111) RNA Homo sapiens
Homo sapiens
bone marrow K562 RIP input RNA (total)
9 GSM998790 iLN_InVivo_Rep4_DyeSwap2-2_4 62,830 University of Liege 2012-09-06 [Tiling Array] Agilent-029585 BosTaurus_AlHV-1_60K_v1.0 (GPL16018) RNA Bos taurus
Bos taurus
lymphnode Inguinal lymphnode from AlHV-1 infected individual 911 Inguinal lymphnode from Mock infected individual 846
10 GSM998789 iLN_InVivo_Rep4_DyeSwap1-2_3 62,830 University of Liege 2012-09-06 [Tiling Array] Agilent-029585 BosTaurus_AlHV-1_60K_v1.0 (GPL16018) RNA Bos taurus
Bos taurus
lymphnode Inguinal lymphnode from Mock infected individual 846 Inguinal lymphnode from AlHV-1 infected individual 911
11 GSM998788 iLN_InVivo_Rep3_DyeSwap2-2_2 62,830 University of Liege 2012-09-06 [Tiling Array] Agilent-029585 BosTaurus_AlHV-1_60K_v1.0 (GPL16018) RNA Bos taurus
Bos taurus
lymphnode Inguinal lymphnode from AlHV-1 infected individual 273 Inguinal lymphnode from Mock infected individual 619
12 GSM998787 iLN_InVivo_Rep3_DyeSwap1-2_1 62,830 University of Liege 2012-09-06 [Tiling Array] Agilent-029585 BosTaurus_AlHV-1_60K_v1.0 (GPL16018) RNA Bos taurus
Bos taurus
lymphnode Inguinal lymphnode from Mock infected individual 619 Inguinal lymphnode from AlHV-1 infected individual 273
13 GSM998786 iLN_InVivo_Rep2_DyeSwap2-1_4 62,830 University of Liege 2012-09-06 [Tiling Array] Agilent-029585 BosTaurus_AlHV-1_60K_v1.0 (GPL16018) RNA Bos taurus
Bos taurus
lymphnode Inguinal lymphnode from AlHV-1 infected individual 718 Inguinal lymphnode from Mock infected individual 969
14 GSM998785 iLN_InVivo_Rep2_DyeSwap1-1_3 62,830 University of Liege 2012-09-06 [Tiling Array] Agilent-029585 BosTaurus_AlHV-1_60K_v1.0 (GPL16018) RNA Bos taurus
Bos taurus
lymphnode Inguinal lymphnode from Mock infected individual 969 Inguinal lymphnode from AlHV-1 infected individual 718
15 GSM998728 iLN_InVivo_Rep1_DyeSwap2-1_2 62,830 University of Liege 2012-09-06 [Tiling Array] Agilent-029585 BosTaurus_AlHV-1_60K_v1.0 (GPL16018) RNA Bos taurus
Bos taurus
lymphnode Inguinal lymphnode from AlHV-1 infected individual 617 Inguinal lymphnode from Mock infected individual 436
16 GSM998727 iLN_InVivo_Rep1_DyeSwap1-1_1 62,830 University of Liege 2012-09-06 [Tiling Array] Agilent-029585 BosTaurus_AlHV-1_60K_v1.0 (GPL16018) RNA Bos taurus
Bos taurus
lymphnode Inguinal lymphnode from Mock infected individual 436 Inguinal lymphnode from AlHV-1 infected individual 617
17 GSM998357 MDBK_InVitro_Rep4_DyeSwap2-2_4 62,830 University of Liege 2012-09-05 [Tiling Array] Agilent-029585 BosTaurus_AlHV-1_60K_v1.0 (GPL16018) RNA Bos taurus
Bos taurus
unclassified source_name:AlHV-1 infected MDBK cells Mock infected MDBK cells title:MDBK_InVitro_Rep4_DyeSwap2-2_4
18 GSM998356 MDBK_InVitro_Rep4_DyeSwap1-2_3 62,830 University of Liege 2012-09-05 [Tiling Array] Agilent-029585 BosTaurus_AlHV-1_60K_v1.0 (GPL16018) RNA Bos taurus
Bos taurus
unclassified source_name:Mock infected MDBK cells AlHV-1 infected MDBK cells title:MDBK_InVitro_Rep4_DyeSwap1-2_3
19 GSM998355 MDBK_InVitro_Rep3_DyeSwap2-2_2 62,830 University of Liege 2012-09-05 [Tiling Array] Agilent-029585 BosTaurus_AlHV-1_60K_v1.0 (GPL16018) RNA Bos taurus
Bos taurus
unclassified source_name:AlHV-1 infected MDBK cells Mock infected MDBK cells title:MDBK_InVitro_Rep3_DyeSwap2-2_2
20 GSM998354 MDBK_InVitro_Rep3_DyeSwap1-2_1 62,830 University of Liege 2012-09-05 [Tiling Array] Agilent-029585 BosTaurus_AlHV-1_60K_v1.0 (GPL16018) RNA Bos taurus
Bos taurus
unclassified source_name:Mock infected MDBK cells AlHV-1 infected MDBK cells title:MDBK_InVitro_Rep3_DyeSwap1-2_1
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