Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(129)
  Primates
(2)
  Rodents
(67)
  Mammals
(8)
  Vertebrates
(14)
  Invertebrates
(24)
  Plants
(99)
  Bacteria
(32)
  Viruses
(1)
  Phages
(1)
  Unclassified
(8)
  All
(385)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(21)
  Tiling Array
(52)
  cDNA Array
(92)
  Oligo Array
(211)
  Bead Array
(1)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(5)
  HT-Seq
(1)
  Other
(2)
  All
(385)
 
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL7026 Human Promoter Array 1.0R - NCBI build_35 5,150,820 University of Tokyo 2008-07-07 Affymetrix Homo sapiens
Homo sapiens
GeneChip in situ oligonucleotide, Human Promoter Array 1.0R - NCBI build_35, For data analysis of the associated Samples, we calculated MAT scores based on the hyridization intensity data of the probes within 500bp windows. The coordinate column in the Platform data table represents the chromosome coordinates for the 500bp window center positions.
2 GPL6138 GeneChip Human Tiling 1.0R Array set (8) - NCBI build 36 3,138,510 The University of Tokyo 2007-11-14 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, GeneChip Human Tiling 1.0R Array set (8) - NCBI build 36, For data analysis of the associated Samples, we calculated MAT scores based on the hyridization intensity data of the probes within 500bp windows. The coordinate column in the Platform data table represents the chromosome coordinates for the 500bp window center positions. The supplementary files (linked below) also report the 500bp window start and end positions (and also sequence of 500bp unit region for used for analysis).
3 GPL5661 Human tiling 1.0F array, chip 10 of 14 3,102,388 RIKEN 2007-07-24 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, Human tiling 1.0F array, chip 10 of 14,
4 GPL5652 Human tiling 1.0F array, chip 3 of 14 3,102,380 RIKEN 2007-07-24 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, Human tiling 1.0F array, chip 3 of 14,
5 GPL5654 Human tiling 1.0F array, chip 4 of 14 3,102,050 RIKEN 2007-07-24 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, Human tiling 1.0F array, chip 4 of 14,
6 GPL5662 Human tiling 1.0F array, chip 11 of 14 3,101,750 RIKEN 2007-07-24 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, Human tiling 1.0F array, chip 11 of 14,
7 GPL5659 Human tiling 1.0F array, chip 9 of 14 3,101,566 RIKEN 2007-07-24 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, Human tiling 1.0F array, chip 9 of 14,
8 GPL6139 GeneChip Human Tiling 1.0R Array set (9) - NCBI build 36 3,101,522 The University of Tokyo 2007-11-14 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, GeneChip Human Tiling 1.0R Array set (9) - NCBI build 36, For data analysis of the associated Samples, we calculated MAT scores based on the hyridization intensity data of the probes within 500bp windows. The coordinate column in the Platform data table represents the chromosome coordinates for the 500bp window center positions. The supplementary files (linked below) also report the 500bp window start and end positions (and also sequence of 500bp unit region for used for analysis).
9 GPL5657 Human tiling 1.0F array, chip 7 of 14 3,101,444 RIKEN 2007-07-24 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, Human tiling 1.0F array, chip 7 of 14,
10 GPL5664 Human tiling 1.0F array, chip 13 of 14 3,101,278 RIKEN 2007-07-24 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, Human tiling 1.0F array, chip 13 of 14,
11 GPL5651 Human tiling 1.0F array, chip 2 of 14 3,100,706 RIKEN 2007-07-24 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, Human tiling 1.0F array, chip 2 of 14,
12 GPL5656 Human tiling 1.0F array, chip 6 of 14 3,099,552 RIKEN 2007-07-24 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, Human tiling 1.0F array, chip 6 of 14,
13 GPL5658 Human tiling 1.0F array, chip 8 of 14 3,097,794 RIKEN 2007-07-24 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, Human tiling 1.0F array, chip 8 of 14,
14 GPL5655 Human tiling 1.0F array, chip 5 of 14 3,096,760 RIKEN 2007-07-24 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, Human tiling 1.0F array, chip 5 of 14,
15 GPL5663 Human tiling 1.0F array, chip 12 of 14 3,096,251 RIKEN 2007-07-24 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, Human tiling 1.0F array, chip 12 of 14,
16 GPL6131 GeneChip Human Tiling 1.0R Array set (1) - NCBI build 36 3,095,969 The University of Tokyo 2007-11-14 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, GeneChip Human Tiling 1.0R Array set (1) - NCBI build 36, For data analysis of the associated Samples, we calculated MAT scores based on the hyridization intensity data of the probes within 500bp windows. The coordinate column in the Platform data table represents the chromosome coordinates for the 500bp window center positions. The supplementary files (linked below) also report the 500bp window start and end positions (and also sequence of 500bp unit region for used for analysis).
17 GPL6136 GeneChip Human Tiling 1.0R Array set (6) - NCBI build 36 3,095,856 The University of Tokyo 2007-11-14 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, GeneChip Human Tiling 1.0R Array set (6) - NCBI build 36, For data analysis of the associated Samples, we calculated MAT scores based on the hyridization intensity data of the probes within 500bp windows. The coordinate column in the Platform data table represents the chromosome coordinates for the 500bp window center positions. The supplementary files (linked below) also report the 500bp window start and end positions (and also sequence of 500bp unit region for used for analysis).
18 GPL6133 GeneChip Human Tiling 1.0R Array set (3) - NCBI build 36 3,095,816 The University of Tokyo 2007-11-14 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, GeneChip Human Tiling 1.0R Array set (3) - NCBI build 36, For data analysis of the associated Samples, we calculated MAT scores based on the hyridization intensity data of the probes within 500bp windows. The coordinate column in the Platform data table represents the chromosome coordinates for the 500bp window center positions. The supplementary files (linked below) also report the 500bp window start and end positions (and also sequence of 500bp unit region for used for analysis).
19 GPL6134 GeneChip Human Tiling 1.0R Array set (4) - NCBI build 36 3,095,657 The University of Tokyo 2007-11-14 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, GeneChip Human Tiling 1.0R Array set (4) - NCBI build 36, For data analysis of the associated Samples, we calculated MAT scores based on the hyridization intensity data of the probes within 500bp windows. The coordinate column in the Platform data table represents the chromosome coordinates for the 500bp window center positions. The supplementary files (linked below) also report the 500bp window start and end positions (and also sequence of 500bp unit region for used for analysis).
20 GPL6141 GeneChip Human Tiling 1.0R Array set (11) - NCBI build 36 3,095,630 The University of Tokyo 2007-11-14 Affymetrix Homo sapiens
Homo sapiens
Tiling Array in situ oligonucleotide, GeneChip Human Tiling 1.0R Array set (11) - NCBI build 36, For data analysis of the associated Samples, we calculated MAT scores based on the hyridization intensity data of the probes within 500bp windows. The coordinate column in the Platform data table represents the chromosome coordinates for the 500bp window center positions. The supplementary files (linked below) also report the 500bp window start and end positions (and also sequence of 500bp unit region for used for analysis).
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