Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(32)		   Primates
(0)		   Rodents
(23)		   Mammals
(1)		   Vertebrates
(4)		   Invertebrates
(3)		   Plants
(46)		   Bacteria
(1)		   Viruses
(0)		   Phages
(0)		   Unclassified
(3)		   All
(113)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(7)		   Tiling Array
(7)		   cDNA Array
(60)		   Oligo Array
(36)		   Bead Array
(2)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(1)		   All
(113)		  
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL9485 NimbleGen Mouse MM8 Deluxe Promoter Array 2,137,504 Lund University 2009-10-23 NimbleGen Mus musculus
Mus musculus		 Oligo Array in situ oligonucleotide, NimbleGen Mouse MM8 Deluxe Promoter Array, 182007-09-21_MM8_Deluxe_Promoter_HX1
2 GPL7878 ohlsson_mm6_dedicated 389,353 Karolinska Institute 2008-12-20 NimbleGen Inc. Mus musculus
Mus musculus		 Tiling Array spotted oligonucleotide, ohlsson_mm6_dedicated, Customized tiling array was designed based on our genome-wide 4C screening (data not uploaded) for mm6 assembly of mouse genome.
3 GPL5404 Chromosome 4 tiling array (genome release 4) 384,249 Umea University 2007-06-21 Nimblegen Drosophila melanogaster
Drosophila melanogaster		 Tiling Array in situ oligonucleotide, Chromosome 4 tiling array (genome release 4),
4 GPL16116 MoEx-1_0-st Mus musculus ENSE version 14 330,190 Karolinska Institute 2012-09-28 Affymetrix Mus musculus
Mus musculus		 GeneChip in situ oligonucleotide, MoEx-1_0-st Mus musculus ENSE version 14,
5 GPL7203 LUH Human Genome CGH Microarray 244A 239,115 Dept of Clinical Genetics 2008-08-22 Agilent Technologies Homo sapiens
Homo sapiens		 Oligo Array in situ oligonucleotide, LUH Human Genome CGH Microarray 244A, This microarray is Agilent’s premium product for human DNA copy-number profiling. Over 236,000 60-mer oligonucleotide probes, specifically optimized for copy-number measurement, span coding and non-coding genomic sequences with median spacing of 7.4 kb and 16.5 kb respectively. This microarray is designed for use with Agilent’s optimized assay protocols, enabling researchers to use nanogram levels of total genomic DNA without complexity reduction.
6 GPL8222 Zoarces viviparus validation microarray 124,992 University of Gothenburg 2009-02-23 Department of Zoology, University of Gothenburg / Febit gmbh, Heidelberg, Germany Zoarces viviparus
Zoarces viviparus		 Oligo Array in situ oligonucleotide, Zoarces viviparus validation microarray, This microarray contains 117,316 probes used to evaluate the transcript assembly described in Kristiansson et al 2009.
7 GPL5345 SWEGENE H_v2.1.1 55K 55,488 SCIBLU - Swegene Centre for Integrative Biology at Lund University 2007-06-01 Swegene DNA Microarray Resource Centre Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, SWEGENE H_v2.1.1 55K,
8 GPL7180 LUH Illumina human-6 v2.0 expression beadchip 46,713 Dept of Clinical Genetics 2008-08-18 Illumina Inc. Homo sapiens
Homo sapiens		 Bead Array oligonucleotide beads, LUH Illumina human-6 v2.0 expression beadchip, Researchers can generate whole genome expression profiles for multiple samples on a single BeadChip. Researchers can profile six or eight samples perBeadChip, with more than 48,000 transcript probes per sample using the Human-6 v2 beadchip.
9 GPL8833 Lund Strategic Center Mouse Illumina Expression Chip V6.1.1 46,657 Lund Strategic Center for Stem Cell Biology and Cell Therapy 2009-07-08 Illumina Mus musculus
Mus musculus		 Bead Array oligonucleotide beads, Lund Strategic Center Mouse Illumina Expression Chip V6.1.1,
10 GPL14736 Agilent-023576 Helicoverpa armigera V3 44K 43,863 Stockholm University 2011-10-14 Agilent Technologies Helicoverpa armigera
Helicoverpa armigera		 Oligo Array in situ oligonucleotide, Agilent-023576 Helicoverpa armigera V3 44K, Arrays of this design have barcodes that begin with 16023576 or 2523576. The ID column represents the Agilent Probe name.
11 GPL6538 Alternative Mouse Exon 1.0 ST Array [CDF: MmEx10stv1_Mm_REFSEQ_8] 43,029 Karolinska Institutet 2008-02-28 Affymetrix Mus musculus
Mus musculus		 GeneChip in situ oligonucleotide, Alternative Mouse Exon 1.0 ST Array [CDF: MmEx10stv1_Mm_REFSEQ_8], Custom CDF linked to this submission as a supplementary file
12 GPL5058 SHCU 43,008 Karolinska Institute, Karolinska University Hospital, Solna 2007-04-03 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, SHCU,
13 GPL7191 Print_730 43,008 Karolinska Institute, Karolinska University Hospital, Solna 2008-08-21 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, Print_730,
14 GPL9077 SWEGENE_BAC_38K 41,760 SCIBLU - Swegene Centre for Integrative Biology at Lund University 2009-08-21 SCIBLU - Swegene Centre for Integrative Biology at Lund University Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, SWEGENE_BAC_38K,
15 GPL5067 SHEU 41,472 Karolinska Institute, Karolinska University Hospital, Solna 2007-04-05 Stanford Functional Genomics Facility, Stanford School of Medicine Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, SHEU,
16 GPL13421 SWEGENE mouseV4_37K_withControls 37,632 SCIBLU - Swegene Centre for Integrative Biology at Lund University 2011-04-18 Swegene DNA Microarray Resource Centre Mus musculus
Mus musculus		 Oligo Array spotted oligonucleotide, SWEGENE mouseV4_37K_withControls,
17 GPL1440 LUNDNIH_Mouse_37K_1 37,632 Lund University 2004-09-09 Mus musculus
Mus musculus		 cDNA Array spotted DNA/cDNA, LUNDNIH_Mouse_37K_1, Mouse cDNA 37K
18 GPL1441 LUNDNIH_Mouse_37K_2 37,632 Lund University 2004-09-09 Mus musculus
Mus musculus		 cDNA Array spotted DNA/cDNA, LUNDNIH_Mouse_37K_2, Mouse cDNA 37K
19 GPL13140 KTH Hum 34k Oligo Microarray 36,864 Uppsala University 2011-02-08 KTH Microarray Center http://www.biotech.kth.se/molbio/microarray/ Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, KTH Hum 34k Oligo Microarray,
20 GPL7768 KTH Human 30k v1.0 36,864 Royal Institute of Technology 2008-12-10 Royal Institute of Technology, Stockholm, Sweden Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, KTH Human 30k v1.0,
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