Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(74)		   Primates
(0)		   Rodents
(36)		   Mammals
(9)		   Vertebrates
(11)		   Invertebrates
(39)		   Plants
(54)		   Bacteria
(33)		   Viruses
(1)		   Phages
(0)		   Unclassified
(1)		   All
(258)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(3)		   GeneChip
(17)		   Tiling Array
(29)		   cDNA Array
(125)		   Oligo Array
(78)		   Bead Array
(1)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(1)		   Other
(3)		   All
(258)		  
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL3923 Affymetrix Drosophila Melanogaster Antisense Tiling Array 3,214,785 Affymetrix, Inc. 2006-06-26 Affymetrix Drosophila melanogaster
Drosophila melanogaster		 Tiling Array in situ oligonucleotide, Affymetrix Drosophila Melanogaster Antisense Tiling Array, 35bp Resolution Oligonucleotide Tiling Array Annotation in this record is based on BDGP Release 4, Apr 2004 version Keywords: synthetic, oligonucleotide, tiling array
2 GPL3943 Arabidopsis Whole Genome Tiling Array 17-rc-3 818,872 The Salk Institute 2006-06-28 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Arabidopsis Whole Genome Tiling Array 17-rc-3, This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was originally used to make these chips, however, the position coordinates in the table are remapped on and refer to the Arabidopsis genome version 6 sequence.
3 GPL3944 Arabidopsis Whole Genome Tiling Array 17-rc-2 818,872 The Salk Institute 2006-06-28 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Arabidopsis Whole Genome Tiling Array 17-rc-2, This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was originally used to make these chips, however, the position coordinates in the table are remapped on and refer to the Arabidopsis genome version 6 sequence.
4 GPL3945 Arabidopsis Whole Genome Tiling Array 17-rc-5 818,872 The Salk Institute 2006-06-28 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Arabidopsis Whole Genome Tiling Array 17-rc-5, This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was originally used to make these chips, however, the position coordinates in the table are remapped on and refer to the Arabidopsis genome version 6 sequence.
5 GPL3946 Arabidopsis Whole Genome Tiling Array 17-rc-6 818,872 The Salk Institute 2006-06-28 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Arabidopsis Whole Genome Tiling Array 17-rc-6, This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was originally used to make these chips, however, the position coordinates in the table are remapped on and refer to the Arabidopsis genome version 6 sequence.
6 GPL3947 Arabidopsis Whole Genome Tiling Array 17-rc-4 818,872 The Salk Institute 2006-06-28 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Arabidopsis Whole Genome Tiling Array 17-rc-4, This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was originally used to make these chips, however, the position coordinates in the table are remapped on and refer to the Arabidopsis genome version 6 sequence.
7 GPL3940 Arabidopsis Whole Genome Tiling Array 17-rc-1 818,871 The Salk Institute 2006-06-28 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Arabidopsis Whole Genome Tiling Array 17-rc-1, This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was originally used to make these chips, however, the position coordinates in the table are remapped on and refer to the Arabidopsis genome version 6 sequence.
8 GPL3932 Arabidopsis Whole Genome Tiling Array 17-1 818,714 The Salk Institute 2006-06-28 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Arabidopsis Whole Genome Tiling Array 17-1, This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was originally used to make these chips, however, the position coordinates in the table are remapped on and refer to the Arabidopsis genome version 6 sequence.
9 GPL3933 Arabidopsis Whole Genome Tiling Array 17-2 818,714 The Salk Institute 2006-06-28 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Arabidopsis Whole Genome Tiling Array 17-2, This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was originally used to make these chips, however, the position coordinates in the table are remapped on and refer to the Arabidopsis genome version 6 sequence.
10 GPL3934 Arabidopsis Whole Genome Tiling Array 17-3 818,714 The Salk Institute 2006-06-28 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Arabidopsis Whole Genome Tiling Array 17-3, This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was originally used to make these chips, however, the position coordinates in the table are remapped on and refer to the Arabidopsis genome version 6 sequence.
11 GPL3938 Arabidopsis Whole Genome Tiling Array 17-5 818,714 The Salk Institute 2006-06-28 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Arabidopsis Whole Genome Tiling Array 17-5, This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was originally used to make these chips, however, the position coordinates in the table are remapped on and refer to the Arabidopsis genome version 6 sequence.
12 GPL3939 Arabidopsis Whole Genome Tiling Array 17-6 818,714 The Salk Institute 2006-06-28 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Arabidopsis Whole Genome Tiling Array 17-6, This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was originally used to make these chips, however, the position coordinates in the table are remapped on and refer to the Arabidopsis genome version 6 sequence.
13 GPL3937 Arabidopsis Whole Genome Tiling Array 17-4 797,133 The Salk Institute 2006-06-28 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Arabidopsis Whole Genome Tiling Array 17-4, This Affymetrix array tiles the Arabidopsis genome end to end using in situ synthesized 25 bp oligonucleotides. The January 2002 version of the Arabidopsis genome sequence was originally used to make these chips, however, the position coordinates in the table are remapped on and refer to the Arabidopsis genome version 6 sequence.
14 GPL3725 Affymetrix ENCODE Tiling Array - SENSE - NCBI build 35 736,787 Affymetrix, Inc. 2006-05-03 Affymetrix Homo sapiens
Homo sapiens		 Tiling Array in situ oligonucleotide, Affymetrix ENCODE Tiling Array - SENSE - NCBI build 35, 21bp resolution oligonucleotide tiling array. Annotation in this record based on NCBI build 35.
15 GPL3701 NKI/VanSteensel_HSAP_390k_2005-08-15_Vogel_human 390,879 Netherlands Cancer Institute 2006-04-25 NimbleGen Systems Inc. Homo sapiens
Homo sapiens		 Oligo Array in situ oligonucleotide, NKI/VanSteensel_HSAP_390k_2005-08-15_Vogel_human, Non-repetitive part of Human Chromosome 19, ENCODE regions, Promoters, Ultraconserved elements, Based on Human genome sequence NCBI 35.
16 GPL3793 Nimblegen Mouse 1.5 kb promoter array [2006-11-16_MM5_min_promoter] 386,424 UC Davis Genome Center 2006-05-22 Nimblegen Mus musculus
Mus musculus		 Oligo Array in situ oligonucleotide, Nimblegen Mouse 1.5 kb promoter array [2006-11-16_MM5_min_promoter],
17 GPL3792 Nimblegen Human ENCODE array 385,149 UC Davis Genome Center 2006-05-22 Nimblegen Homo sapiens
Homo sapiens		 Oligo Array in situ oligonucleotide, Nimblegen Human ENCODE array,
18 GPL3786 SKCC Salmonella 380K tiling array 382,864 Vaccine Research Institute of San Diego 2006-05-19 NimbleGen Salmonella
Salmonella		 Tiling Array in situ oligonucleotide, SKCC Salmonella 380K tiling array, This set includes 382864 46~50mer oligonucleotides, mostly 50-mers. The probes were designed based on Salmonella typhimurium LT2 (NC_003197.1) genome, with a moving window of about 12 bases.
19 GPL3794 Nimblegen Mouse custom array 381,876 UC Davis Genome Center 2006-05-22 Nimblegen Mus musculus
Mus musculus		 Oligo Array in situ oligonucleotide, Nimblegen Mouse custom array,
20 GPL3791 Nimblegen Human 5K promoter array 2 364,132 UC Davis Genome Center 2006-05-22 Nimblegen Homo sapiens
Homo sapiens		 Oligo Array in situ oligonucleotide, Nimblegen Human 5K promoter array 2,
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