Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(67)

Viruses
(0)

Phages
(0)

Unclassified
(8)

All
(275)

SAGE NlaIII
(3)

SAGE RsaI
(0)

SAGE Sau3A
(0)

Antibody
(0)

All
(275)

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	Platform ID	Title	Number of the probes	Institute	Submission date	Manufacturer	Species	Platform class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GPL4499	Human whole genome tiling array, chip 11 of 14	3,317,284	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 11 of 14,
2	GPL4496	Human whole genome tiling array, chip 08 of 14	3,316,927	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 08 of 14,
3	GPL4495	Human whole genome tiling array, chip 07 of 14	3,207,896	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 07 of 14,
4	GPL4500	Human whole genome tiling array, chip 12 of 14	3,201,270	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 12 of 14,
5	GPL4502	Human whole genome tiling array, chip 13 of 14	3,161,722	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 13 of 14,
6	GPL4490	Human whole genome tiling array, chip 02 of 14	3,121,530	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 02 of 14,
7	GPL4493	Human whole genome tiling array, chip 05 of 14	3,110,356	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 05 of 14,
8	GPL4489	Human whole genome tiling array, chip 01 of 14	3,012,992	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 01 of 14,
9	GPL4497	Human whole genome tiling array, chip 09 of 14	2,995,629	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 09 of 14,
10	GPL4494	Human whole genome tiling array, chip 06 of 14	2,962,602	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 06 of 14,
11	GPL4492	Human whole genome tiling array, chip 04 of 14	2,960,773	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 04 of 14,
12	GPL4491	Human whole genome tiling array, chip 03 of 14	2,924,606	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 03 of 14,
13	GPL4498	Human whole genome tiling array, chip 10 of 14	2,911,857	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 10 of 14,
14	GPL4503	Human whole genome tiling array, chip 14 of 14	1,762,422	Harvard Medical School	2006-10-25	Affymetrix	Homo sapiens	Tiling Array	in situ oligonucleotide, Human whole genome tiling array, chip 14 of 14,
15	GPL4614	NimbleGen_DesignID3426_UNC_LiebLab tiling array	577,211	UNC-Chapel Hill	2006-11-30	NimbleGen Inc.	Caenorhabditis elegans	Tiling Array	in situ oligonucleotide, NimbleGen_DesignID3426_UNC_LiebLab tiling array,
16	GPL4619	NimbleGen_DesignID3427_UNC_LiebLab tiling array	577,211	UNC-Chapel Hill	2006-12-01	NimbleGen Inc.	Caenorhabditis elegans	Tiling Array	in situ oligonucleotide, NimbleGen_DesignID3427_UNC_LiebLab tiling array,
17	GPL4559	ENCODE NimbleGen hg17 tiling array	391,015	Ludwig Institute for Cancer Research	2006-11-14	NimbleGen Systems Inc.	Homo sapiens	Tiling Array	in situ oligonucleotide, ENCODE NimbleGen hg17 tiling array, 391K element tiling array based on NCBI35 build of the human genome (hg17) and contains overlapping 50-mer oligonucleotides, positioned at every 38 basepairs (bp) throughout the ENCODE regions.
18	GPL4628	Nimblegen Dana expression custom array/2005-06-03_D_ananassae_50mer	391,015	NIDDK, NIH	2006-12-05	NimbleGen Systems Inc.	Drosophila ananassae	Oligo Array	in situ oligonucleotide, Nimblegen Dana expression custom array/2005-06-03_D_ananassae_50mer, Nimblegen custom design array for Drosophila species expression: An average of 10 array element probes per predicted genes was selected without-bias vis-a-vis position within the gene model. Sources of gene predictions include EIS (Annotations from Eisen lab v.1.0, Feb. 2005), GID (ab-initio GeneID predictions on draft assembly), and GBK (EST sequence from GeneBank). Probes have been remapped to final genome assemblies (Comparative Assembly Freeze 1 CAF1, http://rana.lbl.gov/drosophila/caf1.html) and genome annotation (GLEANR set, http://rana.lbl.gov/~venky/AAA/freeze_20061030/protein_coding_gene/GLEANR/annotation). Arrays are described in detail on http://intramural.niddk.nih.gov/research/multifly/multifly.htm.
19	GPL4629	Nimblegen Drosophila melanogaster expression array/2005-10-17_Dmel4_60mer_exp	391,015	NIDDK, NIH	2006-12-05	NimbleGen Systems Inc.	Drosophila melanogaster	Oligo Array	in situ oligonucleotide, Nimblegen Drosophila melanogaster expression array/2005-10-17_Dmel4_60mer_exp,
20	GPL4630	Nimblegen Dmoj expression custom array/2005-06-03_D_mojavensis_50mer	391,015	NIDDK, NIH	2006-12-05	NimbleGen Systems Inc.	Drosophila mojavensis	Oligo Array	in situ oligonucleotide, Nimblegen Dmoj expression custom array/2005-06-03_D_mojavensis_50mer, Nimblegen custom design array for Drosophila species expression: An average of 10 array element probes per predicted genes was selected without-bias vis-a-vis position within the gene model. Sources of gene predictions include EIS (Annotations from Eisen lab v.1.0, Feb. 2005), GID (ab-initio GeneID predictions on draft assembly), and GBK (EST sequence from GeneBank). Probes have been remapped to final genome assemblies (Comparative Assembly Freeze 1 CAF1, http://rana.lbl.gov/drosophila/caf1.html) and genome annotation (GLEANR set, http://rana.lbl.gov/~venky/AAA/freeze_20061030/protein_coding_gene/GLEANR/annotation). Arrays are described in detail on http://intramural.niddk.nih.gov/research/multifly/multifly.htm.

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