Gene Expression Omnibus (GEO) Overview Version：2013-05-25Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(743)		   Primates
(5)		   Rodents
(386)		   Mammals
(31)		   Vertebrates
(51)		   Invertebrates
(187)		   Plants
(209)		   Bacteria
(89)		   Viruses
(1)		   Phages
(0)		   Unclassified
(12)		   All
(1,715)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(4)		   GeneChip
(559)		   Tiling Array
(136)		   cDNA Array
(101)		   Oligo Array
(596)		   Bead Array
(143)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(3)		   HT-Seq
(171)		   Other
(2)		   All
(1,715)		  
1   |   2   |   3   |   4   |   5      »      [86]
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 NF1 inactivation in adult acute myelogenous leukemia (GSE21107) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of Michigan 2010-03-29 Homo sapiens
Homo sapiens		 351,708,478
(1,880,794 x 187) 		95 92 by_platform
by_series
2 Integrative genomic profiling of human prostate cancer (GSE21032) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Memorial Sloan-Kettering Cancer Center 2010-03-23 Homo sapiens
Homo sapiens		 264,948,675
(1,432,155 x 185) 		185 by_platform
by_series
3 Whole-transcript and exon-level expression data for human primary and metastatic prostate cancer samples and control normal adjacent benign prostate (GSE21034) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Memorial Sloan-Kettering Cancer Center 2010-03-23 Homo sapiens
Homo sapiens		 264,948,675
(1,432,155 x 185) 		185 by_platform
by_series
4 Integrative genome-wide expression profiling identifies three distinct molecular subgroups of renal cell carcinoma with different patient outcome (GSE19949) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of Zurich 2010-01-19 Homo sapiens
Homo sapiens		 214,410,516
(1,880,794 x 114) 		114 by_platform
by_series
5 Identification of novel sub-microscopic copy number aberrations in adult acute myeloid leukemia (GSE20672) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Queen Mary University of London 2010-03-08 Homo sapiens
Homo sapiens		 210,648,928
(1,880,794 x 112) 		112 by_platform
by_series
6 A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers (GSE20306) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) Massachusetts General Hospital 2010-02-12 Homo sapiens
Homo sapiens		 107,270,100
(238,378 x 450) 		10 16 73 44 1 61 12 129 31 40 26 7 by_platform
by_series
7 Affymetrix SNP array data for soft tissue sarcoma samples (GSE21123) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) Memorial Sloan-Kettering Cancer Center 2010-03-30 Homo sapiens
Homo sapiens		 98,926,870
(238,378 x 415) 		415 by_platform
by_series
8 Subtype-specific genomic alterations define new targets for soft tissue sarcoma therapy (GSE21124) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) Memorial Sloan-Kettering Cancer Center 2010-03-30 Homo sapiens
Homo sapiens		 98,926,870
(238,378 x 415) 		415 by_platform
by_series
9 Agilent 244A aCGH array for breast, lung, melanoma, ovary, and prostate (GSE20393) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Probe name version) (GPL9128) Genentech, Inc. 2010-02-17 Homo sapiens
Homo sapiens		 88,171,605
(236,385 x 373) 		51 109 52 161 by_platform
by_series
10 Primary human leucocyte RNA expression of unrelated Dutch individuals. (GSE20142) [Bead Array] Illumina HumanHT-12 V3.0 expression beadchip (GPL6947) University Medical Centre Groningen 2010-02-02 Homo sapiens
Homo sapiens		 60,515,720
(48,803 x 1,240) 		1,240 by_platform
by_series
11 SNP data from Down syndrome and non-Down syndrome pediatric acute lymphoblastic leukemia cases and controls (GSE21091) [Bead Array] Illumina HumanCNV370-Duov1 DNA Analysis BeadChip (HumanCNV370v1) (GPL6986) Baylor College of Medicine 2010-03-26 Homo sapiens
Homo sapiens		 59,635,044
(370,404 x 161) 		161 by_platform
by_series
12 Genomic profiling in Down syndrome pediatric acute lymphoblastic leukemia (GSE21094) [Bead Array] Illumina HumanCNV370-Duov1 DNA Analysis BeadChip (HumanCNV370v1) (GPL6986) Baylor College of Medicine 2010-03-27 Homo sapiens
Homo sapiens		 59,635,044
(370,404 x 161) 		161 by_platform
by_series
13 Integrative genomic profiling of human prostate cancer (GSE21032) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Feature number version) (GPL4091) Memorial Sloan-Kettering Cancer Center 2010-03-23 Homo sapiens
Homo sapiens		 56,249,424
(243,504 x 231) 		3 1 213 1 1 2 10 by_platform
by_series
14 Agilent 244K aCGH data for human primary and metastatic prostate cancer samples (GSE21035) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Feature number version) (GPL4091) Memorial Sloan-Kettering Cancer Center 2010-03-23 Homo sapiens
Homo sapiens		 56,249,424
(243,504 x 231) 		3 1 213 1 1 2 10 by_platform
by_series
15 Affymetrix SNP array data for esophageal squamous cell carcinoma (ESCC) samples (GSE20123) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) NCI 2010-02-01 Homo sapiens
Homo sapiens		 47,220,840
(262,338 x 180) 		60 120 by_platform
by_series
16 Copy number data from GIST with KIT mutation (GSE20709) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Policlinico S. Orsola-Malpighi, University of Bologna 2010-03-09 Homo sapiens
Homo sapiens		 47,019,850
(1,880,794 x 25) 		25 by_platform
by_series
17 Integrative analysis of gene expression profiling and genomic copy number in Gastrointestinal Stromal Tumors (GSE20710) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Policlinico S. Orsola-Malpighi, University of Bologna 2010-03-09 Homo sapiens
Homo sapiens		 47,019,850
(1,880,794 x 25) 		25 by_platform
by_series
18 Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation: ChIP-chip data (GSE20471) [Tiling Array] Henikoff_Dmel_r52_ChIP tiling design (GPL6888) NIH/NIEHS 2010-02-22 Drosophila melanogaster
Drosophila melanogaster		 44,730,462
(2,130,022 x 21) 		2 19 by_platform
by_series
19 Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation (GSE20472) [Tiling Array] Henikoff_Dmel_r52_ChIP tiling design (GPL6888) NIH/NIEHS 2010-02-22 Drosophila melanogaster
Drosophila melanogaster		 44,730,462
(2,130,022 x 21) 		2 19 by_platform
by_series
20 Affymetrix SNP array data for esophageal squamous cell carcinoma (ESCC) samples (GSE20123) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) NCI 2010-02-01 Homo sapiens
Homo sapiens		 42,908,040
(238,378 x 180) 		60 120 by_platform
by_series
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