Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(102)		   Primates
(4)		   Rodents
(40)		   Mammals
(13)		   Vertebrates
(33)		   Invertebrates
(30)		   Plants
(75)		   Bacteria
(73)		   Viruses
(4)		   Phages
(0)		   Unclassified
(18)		   All
(392)		  
  SAGE NlaIII
(6)		   SAGE RsaI
(0)		   SAGE Sau3A
(1)		   MPSS
(0)		   GeneChip
(20)		   Tiling Array
(27)		   cDNA Array
(57)		   Oligo Array
(216)		   Bead Array
(4)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(2)		   HT-Seq
(57)		   Other
(2)		   All
(392)		  
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL9944 NimbleGen Human 2.1M array [HG18_CGH_LISOv1_HX1] 2,179,164 University of Georgia 2010-01-19 NimbleGen Homo sapiens
Homo sapiens		 Oligo Array in situ oligonucleotide, NimbleGen Human 2.1M array [HG18_CGH_LISOv1_HX1], Annotation in this record based on NCBI human build 36.
2 GPL9973 FSU/NimbleGen Human 2.1M Whole Genome Tiling 2,161,679 Florida State University 2010-01-25 NimbleGen Homo sapiens
Homo sapiens		 Tiling Array in situ oligonucleotide, FSU/NimbleGen Human 2.1M Whole Genome Tiling, Build: Hg18, NCBI 36
3 GPL9991 Hubrecht Rat 2.1M HX1 2,142,096 Hubrecht Institute 2010-01-29 NimbleGen Rattus norvegicus
Rattus norvegicus		 Oligo Array in situ oligonucleotide, Hubrecht Rat 2.1M HX1, Genome assembly: RGSC3.4 native array description file: 080616_Cuppen_rat34_WG_CGH_HX1.ndf native array description file: 080616_Cuppen_rat34_WG_CGH_HX1.pos
4 GPL10129 NimbleGen Mouse 2.1 M array 10 of 10 2,101,973 University of Washington 2010-03-03 NimbleGen Mus musculus
Mus musculus		 Tiling Array in situ oligonucleotide, NimbleGen Mouse 2.1 M array 10 of 10, 2007-07-27_MM8_TILE_ChIP_10_HX1 Annotation in this record based on NCBI mouse build 36. Regions of potential H3K27me3 target genes from mm8, isothermal tiling oligos at 100bp
5 GPL9969 Illumina HumanOmni1 Genotyping BeadChip 1,140,419 CNIO 2010-01-25 Illumina, Inc. Homo sapiens
Homo sapiens		 Bead Array oligonucleotide beads, Illumina HumanOmni1 Genotyping BeadChip,
6 GPL10027 Agilent-017025 Human Whole Genome ChIP Tiling Array Set 1 of 10 974,016 Agilent Technologies 2010-02-11 Agilent Technologies Homo sapiens
Homo sapiens		 Tiling Array in situ oligonucleotide, Agilent-017025 Human Whole Genome ChIP Tiling Array Set 1 of 10, Human Whole Genome ChIP Tiling Array Set 1 of 10 Arrays of this design have barcodes that begin with 16017025 or 2517025. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
7 GPL10028 Agilent-017034 Human Whole Genome ChIP Tiling Array Set 2 of 10 974,016 Agilent Technologies 2010-02-11 Agilent Technologies Homo sapiens
Homo sapiens		 Tiling Array in situ oligonucleotide, Agilent-017034 Human Whole Genome ChIP Tiling Array Set 2 of 10, Human Whole Genome ChIP Tiling Array Set 2 of 10 Arrays of this design have barcodes that begin with 16017034 or 2517034. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
8 GPL10029 Agilent-017036 Human Whole Genome ChIP Tiling Array Set 3 of 10 974,016 Agilent Technologies 2010-02-11 Agilent Technologies Homo sapiens
Homo sapiens		 Tiling Array in situ oligonucleotide, Agilent-017036 Human Whole Genome ChIP Tiling Array Set 3 of 10, Human Whole Genome ChIP Tiling Array Set 3 of 10 Arrays of this design have barcodes that begin with 16017036 or 2517036. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
9 GPL10030 Agilent-017038 Human Whole Genome ChIP Tiling Array Set 4 of 10 974,016 Agilent Technologies 2010-02-11 Agilent Technologies Homo sapiens
Homo sapiens		 Tiling Array in situ oligonucleotide, Agilent-017038 Human Whole Genome ChIP Tiling Array Set 4 of 10, Human Whole Genome ChIP Tiling Array Set 4 of 10 Arrays of this design have barcodes that begin with 16017038 or 2517038. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
10 GPL10031 Agilent-017042 Human Whole Genome ChIP Tiling Array Set 5 of 10 974,016 Agilent Technologies 2010-02-11 Agilent Technologies Homo sapiens
Homo sapiens		 Tiling Array in situ oligonucleotide, Agilent-017042 Human Whole Genome ChIP Tiling Array Set 5 of 10, Human Whole Genome ChIP Tiling Array Set 5 of 10 Arrays of this design have barcodes that begin with 16017042 or 2517042. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
11 GPL10032 Agilent-017044 Human Whole Genome ChIP Tiling Array Set 6 of 10 974,016 Agilent Technologies 2010-02-11 Agilent Technologies Homo sapiens
Homo sapiens		 Tiling Array in situ oligonucleotide, Agilent-017044 Human Whole Genome ChIP Tiling Array Set 6 of 10, Human Whole Genome ChIP Tiling Array Set 6 of 10 Arrays of this design have barcodes that begin with 16017044 or 2517044. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
12 GPL10033 Agilent-017045 Human Whole Genome ChIP Tiling Array Set 7 of 10 974,016 Agilent Technologies 2010-02-11 Agilent Technologies Homo sapiens
Homo sapiens		 Tiling Array in situ oligonucleotide, Agilent-017045 Human Whole Genome ChIP Tiling Array Set 7 of 10, Human Whole Genome ChIP Tiling Array Set 7 of 10 Arrays of this design have barcodes that begin with 16017045 or 2517045. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
13 GPL10034 Agilent-017046 Human Whole Genome ChIP Tiling Array Set 8 of 10 974,016 Agilent Technologies 2010-02-11 Agilent Technologies Homo sapiens
Homo sapiens		 Tiling Array in situ oligonucleotide, Agilent-017046 Human Whole Genome ChIP Tiling Array Set 8 of 10, Human Whole Genome ChIP Tiling Array Set 8 of 10 Arrays of this design have barcodes that begin with 16017046 or 2517046. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
14 GPL10035 Agilent-017047 Human Whole Genome ChIP Tiling Array Set 9 of 10 974,016 Agilent Technologies 2010-02-11 Agilent Technologies Homo sapiens
Homo sapiens		 Tiling Array in situ oligonucleotide, Agilent-017047 Human Whole Genome ChIP Tiling Array Set 9 of 10, Human Whole Genome ChIP Tiling Array Set 9 of 10 Arrays of this design have barcodes that begin with 16017047 or 2517047. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
15 GPL10036 Agilent-017048 Human Whole Genome ChIP Tiling Array Set 10 of 10 974,016 Agilent Technologies 2010-02-11 Agilent Technologies Homo sapiens
Homo sapiens		 Tiling Array in situ oligonucleotide, Agilent-017048 Human Whole Genome ChIP Tiling Array Set 10 of 10, Human Whole Genome ChIP Tiling Array Set 10 of 10 Arrays of this design have barcodes that begin with 16017048 or 2517048. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
16 GPL10153 Agilent-023642 SurePrint G3 Human High-Resolution Discovery Microarray 1x1M (Feature Number version) 974,016 Agilent Technologies 2010-03-09 Agilent Technologies Homo sapiens
Homo sapiens		 Oligo Array in situ oligonucleotide, Agilent-023642 SurePrint G3 Human High-Resolution Discovery Microarray 1x1M (Feature Number version), SurePrint G3 Human High-Resolution Discovery Microarray, 1x1M Arrays of this design have barcodes that begin with 16023642 or 2523642. Data table annotations based on build hg18:NCBI36:Mar2006. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
17 GPL9857 Agilent/SNU human 24M CGH array, 1 of 24 (Feature Number version) 974,016 Genomic Medicine Institute, Seoul National University College of Medicine 2010-01-05 Agilent Homo sapiens
Homo sapiens		 Oligo Array in situ oligonucleotide, Agilent/SNU human 24M CGH array, 1 of 24 (Feature Number version), Custom-designed 24M-oligonucleotide whole-genome array (1.1M X 24 slides). Probes correspond to human genome build UCSC hg18 (NCBI Build 36).
18 GPL9859 Agilent/SNU human 24M CGH array, 2 of 24 (Feature Number version) 974,016 Genomic Medicine Institute, Seoul National University College of Medicine 2010-01-06 Agilent Homo sapiens
Homo sapiens		 Oligo Array in situ oligonucleotide, Agilent/SNU human 24M CGH array, 2 of 24 (Feature Number version), Custom-designed 24M-oligonucleotide whole-genome array (1.1M X 24 slides). Probes correspond to human genome build UCSC hg18 (NCBI Build 36).
19 GPL9874 Agilent/SNU human 24M CGH array, 3 of 24 (Feature Number version) 974,016 Genomic Medicine Institute, Seoul National University College of Medicine 2010-01-10 Agilent Homo sapiens
Homo sapiens		 Oligo Array in situ oligonucleotide, Agilent/SNU human 24M CGH array, 3 of 24 (Feature Number version), Custom-designed 24M-oligonucleotide whole-genome array (1.1M X 24 slides). Probes correspond to human genome build UCSC hg18 (NCBI Build 36).
20 GPL9875 Agilent/SNU human 24M CGH array, 4 of 24 (Feature Number version) 974,016 Genomic Medicine Institute, Seoul National University College of Medicine 2010-01-10 Agilent Homo sapiens
Homo sapiens		 Oligo Array in situ oligonucleotide, Agilent/SNU human 24M CGH array, 4 of 24 (Feature Number version), Custom-designed 24M-oligonucleotide whole-genome array (1.1M X 24 slides). Probes correspond to human genome build UCSC hg18 (NCBI Build 36).
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