Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(228)
  SAGE RsaI
(1)
  SAGE Sau3A
(16)
  MPSS
(67)
  GeneChip
(19,582)
  Tiling Array
(4,015)
  cDNA Array
(5,993)
  Oligo Array
(14,254)
  Bead Array
(4,043)
  Protein Array
(1)
  Antibody
(43)
  RT-PCR
(338)
  HT-Seq
(7,682)
  Other
(247)
  All
(56,529)
 
1   |   2   |   3   |   4   |   5      »      [2827]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Expression data from human breast cancer cells MDA-MB-231-Luc knockdown for RRAS2 expression. (GSE56615) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [CDF: GATExplorer_Ensembl v57] (GPL16987) CNRS UMR5237 2014-04-08 Homo sapiens
Homo sapiens
149,496
(24,916 x 6)
6 by_platform
by_series
2 Negative energy balance and hepatic gene expression patterns in high yielding dairy cows during the early postpartum period (GSE56594) [GeneChip] [Bovine] Affymetrix Bovine Genome Array [CDF: Affyprobeminer, bovineccdscdf] (GPL18534) Teagasc 2014-04-08 Bos taurus
Bos taurus
121,716
(5,796 x 21)
10 11 by_platform
by_series
3 Negative energy balance and splenic gene expression patterns in high yielding dairy cows during the early postpartum period [spleen] (GSE56589) [GeneChip] [Bovine] Affymetrix Bovine Genome Array [CDF: Affyprobeminer, bovineccdscdf] (GPL18534) Teagasc 2014-04-08 Bos taurus
Bos taurus
57,960
(5,796 x 10)
10 by_platform
by_series
4 RNAseq to investigate transcriptional changes in human MM cell lines due to panobinostat, 5-Azacytidine, panobinostat+5-Azacytidine or n-methyl-2-pyrroldine (NMP) treatments. (GSE56623) [HT Sequencing] Illumina HiSeq 2500 (Homo sapiens) (GPL16791) Peter MacCallum Cancer Centre 2014-04-08 Homo sapiens
Homo sapiens
60
(0 x 60)
60 by_platform
by_series
5 Different miRNA expression profiles between human breast cancer turmors and serum (GSE56614) [HT Sequencing] Illumina HiSeq 2500 (Homo sapiens) (GPL16791) Wenzhou Medical University 2014-04-08 Homo sapiens
Homo sapiens
4
(0 x 4)
1 3 by_platform
by_series
6 Expression analysis in anaerobic Hanford 100H aquifer flow-through columns receiving lactate and chromate (GSE56554) [Oligo Array] Functional gene array for anaerobic Hanford 100H aquifer community (GPL18536) LBNL 2014-04-07 unidentified
unidentified
89,902
(44,951 x 2)
2 by_platform
by_series
7 Stress and adaptation of Listeria monocytogenes 08-5923 exposed to a sublethal dose of carnocyclin A (GSE56558) [Oligo Array] NimbleGen Listeria monocytogenes 3K (GPL18538) University of Alberta 2014-04-07 Listeria monocytogenes 08-5923
Listeria monocytogenes 08-5923
85,380
(14,230 x 6)
6 by_platform
by_series
8 Negative energy balance and hepatic gene expression patterns in high yielding dairy cows during the early postpartum period [liver] (GSE56547) [GeneChip] [Bovine] Affymetrix Bovine Genome Array [CDF: Affyprobeminer, bovineccdscdf] (GPL18534) Teagasc 2014-04-07 Bos taurus
Bos taurus
63,756
(5,796 x 11)
11 by_platform
by_series
9 Quantitative sequencing of 5-formylcytosine in DNA at single-base resolution (GSE56572) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) CRUK Cambridge Institute 2014-04-07 Mus musculus
Mus musculus
12
(0 x 12)
12 by_platform
by_series
10 Differential expression of small RNAs from Burkholderia thailandensis in response to varying environmental and stress conditions (GSE56502) [GeneChip] [thaiLANLa520655F] Custom Affymetrix Burkholderia thailandensis E264 8k chip (GPL18529) Los Alamos National Lab 2014-04-03 Burkholderia thailandensis E264
Burkholderia thailandensis E264
1,411,182
(8,711 x 162)
162 by_platform
by_series
11 E.faecalis regulate immune responses in HCT116 cells (GSE56485) [cDNA Array] GEArray S Series Human Immunology Signaling Pathways Gene Array (GPL18527) Danone Nutricia research 2014-04-03 Homo sapiens
Homo sapiens
4,576
(416 x 11)
11 by_platform
by_series
12 ER and RNA PolII ChIP-seq in WT and ER mutant mouse uterus (GSE56501) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) NIEHS 2014-04-03 Mus musculus
Mus musculus
5
(0 x 5)
5 by_platform
by_series
13 Initiation of an inflammatory response in resident intestinal lamina propria cells -use of a human organ culture model (GSE56448) [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) University Hospital Heidelberg 2014-04-02 Homo sapiens
Homo sapiens
377,848
(47,231 x 8)
8 by_platform
by_series
14 The histone methyltransferase activity of MLL1 is dispensable for hematopoiesis and leukemogenesis (GSE56456) [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) Geisel School of Medicine at Dartmouth 2014-04-02 Mus musculus
Mus musculus
11
(0 x 11)
11 by_platform
by_series
15 Nuclear pore complex evolution: A trypanosome Mlp analog functions in chromosomal segregation but lacks transcriptional barrier activity (GSE56436) [HT Sequencing] Illumina Genome Analyzer (Trypanosoma brucei) (GPL18516) Seattle BioMed 2014-04-02 Trypanosoma brucei
Trypanosoma brucei
3
(0 x 3)
3 by_platform
by_series
16 MicroRNA expressions in human hepatocarcinoma cells in response to HBV X protein expression (GSE56424) [Oligo Array] mirVANA miRNA Bioarray V1 (GPL18513) China Medical University 2014-04-01 Homo sapiens
Homo sapiens
384
(96 x 4)
2 2 by_platform
by_series
17 Transcriptional landscape of Rag2 -/- thymocytes (GSE56395) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) University of Birmingham 2014-04-01 Mus musculus
Mus musculus
18
(0 x 18)
18 by_platform
by_series
18 Transcriptional landscape of Rag2 -/- thymocytes [ChIP-Seq] (GSE56393) [HT Sequencing] Illumina Genome Analyzer II (Mus musculus) (GPL9250) University of Birmingham 2014-04-01 Mus musculus
Mus musculus
17
(0 x 17)
17 by_platform
by_series
19 Transcriptional landscape of Rag2 -/- thymocytes (GSE56395) [HT Sequencing] AB SOLiD 4 System (Mus musculus) (GPL14602) University of Birmingham 2014-04-01 Mus musculus
Mus musculus
3
(0 x 3)
3 by_platform
by_series
20 Haemophilus parasuis F9 transcriptome in biofilm and planktonic cultures using RNA sequencing (GSE56428) [HT Sequencing] Ion Torrent PGM (Haemophilus parasuis) (GPL18514) CReSA 2014-04-01 Haemophilus parasuis
Haemophilus parasuis
3
(0 x 3)
3 by_platform
by_series
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