Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page

An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Human (439)   Primates (0)   Rodents (190)   Mammals (0)   Vertebrates (0)   Invertebrates (0)   Plants (80)   Bacteria (0)   Viruses (0)   Phages (0)   Unclassified (0)   All (875)

SAGE NlaIII (0)   SAGE RsaI (0)   SAGE Sau3A (0)   MPSS (0)   GeneChip (261)   Tiling Array (0)   cDNA Array (0)   Oligo Array (103)   Bead Array (0)   Protein Array (0)   Antibody (0)   RT-PCR (0)   HT-Seq (0)   Other (0)   All (875)   1   |   2   |   3   |   4   |   5      »      [44] Title Platform Institute Submission date Species Data size (probes x samples) Sample NCBI FTP site Animal Plant   brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified 1 Identification of genes specifically over-expressed in lupus CD4 T and B cells (GSE4588) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Université catholique de Louvain 2006-03-31 Homo sapiens 2,679,075 (54,675 x 49) 27 22 by_platform by_series 2 High resolution analysis of early lobular neoplastic breast lesions (ALH and LCIS) by whole genome tiling path array CGH (GSE4591) [Tiling Array] BCCRC Lam SMRTr array (GPL2616) Samuel Lunenfeld Research Institute 2006-03-31 Homo sapiens 1,346,400 (53,856 x 25) 25 by_platform by_series 3 Whole-genome expression profiling of melanoma progression. (GSE4587) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) University of Pittsburgh 2006-03-31 Homo sapiens 984,150 (54,675 x 18) 3 11 4 by_platform by_series 4 Expression data from four cconsecutive stages of human B cell development (GSE4590) [GeneChip] [HG_U95A] Affymetrix Human Genome U95A Array (GPL91) Institute for medical microbiology 2006-03-31 Homo sapiens 252,520 (12,626 x 20) 20 by_platform by_series 5 Reprogramming of CTLs into natural killer-like cells in celiac disease (GSE4592) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) University of Chicago 2006-03-31 Homo sapiens 222,830 (22,283 x 10) 4 6 by_platform by_series 6 Breast tumor miRNA profiling (GSE4589) [Oligo Array] miRNA microarray (GPL3238) GlaxoSmithKline 2006-03-31 Homo sapiens 15,360 (768 x 20) 20 by_platform by_series 7 Gene Expression Profiles of Multiple Myeloma (N=414) Before Treatment (GSE4581) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Myeloma Institute for Research and Therapy 2006-03-30 Homo sapiens 22,635,450 (54,675 x 414) 414 by_platform by_series 8 Early pig response to experimental infection with Actinobacillus pleuropneomuniae (GSE4577) [cDNA Array] DIAS_PIG_55K2_v1 (GPL3585) Aarhus University, Faculty of Agricultural Sciences 2006-03-30 Sus scrofa 554,880 (55,488 x 10) 5 5 by_platform by_series 9 B27 modulation of LPS response (GSE4579) [Oligo Array] SRC Human Compugen 19K (GPL3348) University of Cambridge 2006-03-30 Homo sapiens 463,608 (19,317 x 24) 24 by_platform by_series 10 Expression profiling reveals novel pathways in the transformation of melanocytes to melanomas. II (GSE4576) [Oligo Array] OHU16K (old) (GPL3606) Currently unaffilliated 2006-03-30 Homo sapiens 184,320 (18,432 x 10) 10 by_platform by_series 11 Early pig response to experimental infection with Actinobacillus pleuropneomuniae (GSE4577) [Oligo Array] DIAS_PIG_27K2_v2 (GPL3594) Aarhus University, Faculty of Agricultural Sciences 2006-03-30 Sus scrofa 165,888 (27,648 x 6) 6 by_platform by_series 12 Profiling of Dolphin Skin Cells (GSE4580) [cDNA Array] Tursiops truncatus cDNA Microarray version 1.0 (GPL3609) MarineGenomics.org 2006-03-30 Tursiops truncatus 153,600 (19,200 x 8) 8 by_platform by_series 13 Bacteroides fragilis oxidative stress (GSE4583) [Oligo Array] NimbleGen custom-made Bacteroides fragilis NCTC9343 array (GPL3596) East Carolina University 2006-03-30 Bacteroides fragilis 115,344 (4,272 x 27) 27 by_platform by_series 14 The zebrafish runzel mutant results in a novel muscular dystrophy phenotype due to a titin mutation (GSE4585) [GeneChip] [Zebrafish] Affymetrix Zebrafish Genome Array (GPL1319) Harvard Medical School, Children's Hospital 2006-03-30 Danio rerio 93,702 (15,617 x 6) 6 by_platform by_series 15 Transcriptome analysis of A. nidulans growing in different carbon sources (GSE4578) [GeneChip] DTU/CMB_Aspergillusnidulans_9371_v1.0 (GPL3604) Technical University of Denmark 2006-03-30 Emericella nidulans 84,339 (9,371 x 9) 9 by_platform by_series 16 Comparing effects of rapamycin and caffeine on gene expression in YPD media (GSE4584) [cDNA Array] S. cerevisiae cDNA spotted microarray (GPL2763) UC Davis 2006-03-30 Saccharomyces cerevisiae 75,084 (6,257 x 12) 12 by_platform by_series 17 T4_bisthiazolium effect on the malaria parasite transcriptome (GSE4582) [GeneChip] SrcMalaria (Scripps/GNF 2002 affymetrix chip) (GPL3575) University of California 2006-03-30 Plasmodium falciparum 3D7 51,590 (5,159 x 10) 10 by_platform by_series 18 Effect of caffeine on WT versus 3HA-TOR1 [I1954V + W2176R] (GSE4586) [cDNA Array] S. cerevisiae cDNA spotted microarray (GPL2763) UC Davis 2006-03-30 Saccharomyces cerevisiae 37,542 (6,257 x 6) 6 by_platform by_series 19 Gene expression in degenerated rat supraspinatus tendon (GSE4575) [Oligo Array] MWG Rat 5K Array (GPL500) Orthopaedic Research Institute 2006-03-30 Rattus norvegicus 5,760 (5,760 x 1) 1 by_platform by_series 20 Gene expression signatures for predicting prognosis of squamous cell lung carcinomas (GSE4573) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) Veridex, LLC 2006-03-29 Homo sapiens 2,896,790 (22,283 x 130) 130 by_platform by_series 1   |   2   |   3   |   4   |   5      »      [44]