Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(128)		   Primates
(2)		   Rodents
(68)		   Mammals
(8)		   Vertebrates
(16)		   Invertebrates
(24)		   Plants
(97)		   Bacteria
(33)		   Viruses
(1)		   Phages
(1)		   Unclassified
(7)		   All
(385)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(24)		   Tiling Array
(52)		   cDNA Array
(92)		   Oligo Array
(208)		   Bead Array
(1)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(5)		   HT-Seq
(1)		   Other
(2)		   All
(385)		  
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL13528 UIUC Honey Bee oligo 13K v1 12,805 Nagoya University 2011-05-12 University of Illinois Keck Center for Comparative and Functional Genomics Apis mellifera
Apis mellifera		 Oligo Array spotted oligonucleotide, UIUC Honey Bee oligo 13K v1,
2 GPL4242 UCSF Homo sapiens 2.5K 2,464 Chiba Cancer Center Research Institute 2006-08-30 UCSF Cancer Center Microarray Core Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, UCSF Homo sapiens 2.5K,
3 GPL15446 3D-Gene Human miRNA V17_1.0.0 1,719 Toray Industries,Inc. 2012-04-16 Toray Industries,Inc. Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, 3D-Gene Human miRNA V17_1.0.0,
4 GPL13915 3D-Gene Human Oligo chip 25k V2.1 24,460 Toray Industries,Inc. 2011-07-14 TORAY Industries, Inc. Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, 3D-Gene Human Oligo chip 25k V2.1, Ultra-sensitive DNA chip for human genome wide gene expression analysis
5 GPL5639 3D-Gene Human Oligo chip 25k 24,267 TORAY Industries, Inc. 2007-07-24 TORAY Industries, Inc. Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, 3D-Gene Human Oligo chip 25k, Ultra-sensitive DNA chip for human genome wide gene expression analysis
6 GPL5642 3D-Gene Mouse Oligo chip 24k 23,473 TORAY Industries, Inc. 2007-07-24 TORAY Industries, Inc. Mus musculus
Mus musculus		 Oligo Array spotted oligonucleotide, 3D-Gene Mouse Oligo chip 24k, Ultra-sensitive DNA chip for mouse genome wide gene expression analysis
7 GPL10470 3D-Gene Rat Oligo chip 12k 11,986 Toray Industries,Inc. 2010-06-01 TORAY Industries, Inc. Rattus norvegicus
Rattus norvegicus		 Oligo Array spotted oligonucleotide, 3D-Gene Rat Oligo chip 12k, Ultra sensitive DNA chip for rat genome wide gene expession analysis
8 GPL5640 3D-Gene Human Immunity & Metabolic Symdrome 9k 8,953 TORAY Industries, Inc. 2007-07-24 TORAY Industries, Inc. Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, 3D-Gene Human Immunity & Metabolic Symdrome 9k, Ultra-sensitive DNA chip for human gene expression analysis, specially in the studies of immunology and the metabolic syndrome.
9 GPL5670 Human Digestive Cancer 9k 8,495 TORAY Industries, Inc. 2007-07-25 TORAY Industries, Inc. Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, Human Digestive Cancer 9k, Ultra-sensitive DNA chip for human gene expression analysis especially in the digestive cancer studies
10 GPL4399 3D-Gene Yeast Oligo chip S.cerevisiae 6k 5,802 TORAY Industries, Inc. 2006-10-08 TORAY Industries, Inc. Saccharomyces cerevisiae
Saccharomyces cerevisiae		 Oligo Array spotted oligonucleotide, 3D-Gene Yeast Oligo chip S.cerevisiae 6k, Ultra-sensitive DNA chip for S.cerevisiae genome wide gene expression analysis
11 GPL15627 3D-Gene Schizosaccharomyces pombe Yeast Oligo Chip 6k 5,144 Toray Industries,Inc. 2012-05-30 TORAY Industries, Inc. Schizosaccharomyces pombe
Schizosaccharomyces pombe		 Oligo Array spotted oligonucleotide, 3D-Gene Schizosaccharomyces pombe Yeast Oligo Chip 6k,
12 GPL14903 3D-Gene Human miRNA V16_1.0.0 1,212 Toray Industries,Inc. 2011-11-18 Toray Industries, Inc. Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, 3D-Gene Human miRNA V16_1.0.0,
13 GPL16362 3D-Gene Mouse miRNA Oligo Chip V17.1.0 1,135 Toray Industries,Inc. 2012-12-07 Toray Industries, Inc. Mus musculus
Mus musculus		 Oligo Array spotted oligonucleotide, 3D-Gene Mouse miRNA Oligo Chip V17.1.0,
14 GPL14153 3D-Gene Human miRNA V15_1.0.1 1,090 Toray Industries,Inc. 2011-08-16 TORAY Industries, Inc. Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, 3D-Gene Human miRNA V15_1.0.1,
15 GPL13746 3D-Gene Human miRNA V14_1.0.1 1,001 Toray Industries,Inc. 2011-06-18 TORAY Industries, Inc. Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, 3D-Gene Human miRNA V14_1.0.1,
16 GPL9400 3D-Gene Human miRNA Oligo chip v12 935 TORAY Industries, Inc. 2009-10-08 TORAY Industries, inc. Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, 3D-Gene Human miRNA Oligo chip v12,
17 GPL10312 3D-Gene Human miRNA Oligo chip v12-1.00 934 Toray Industries,Inc. 2010-04-14 TORAY Industries, Inc. Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, 3D-Gene Human miRNA Oligo chip v12-1.00,
18 GPL7766 Kyoto Univ. 3D-Gene Human miRNA Oligo chip v11.0 900 Kyoto Univ. 2008-12-10 TORAY Industries, Inc. Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, Kyoto Univ. 3D-Gene Human miRNA Oligo chip v11.0, In “3D-Gene” Human/Mouse miRNA, sense strand oligonucleotides have been spotted on the high performance DNA chip substrate “3D-Gene.” These nucleotides on one “3D-Gene” chip can detect 850 types of human, 610 types of mice, and -350 types of rat miRNAs selected from database mirBase release 11.0. This high performance DNA chip substrate “3D-Gene” was uniquely developed by Toray Industries Inc. Toray uses unique technologies involving the creation of a substrate with characteristic morphology and agitation method using microbeads during reaction, and gene immobilization by molecular control at a nano level. In addition to high reproducibility and quantitative results, ultra high sensitivity has been actualized (0.1 atto-mol = 10-19 mol). This value corresponds to the expression level of 1 copy per 104 cells.
19 GPL7738 3D-Gene Human miRNA Oligo chip v10.1 791 TORAY Industries, Inc. 2008-12-05 TORAY Industries, Inc. Homo sapiens
Homo sapiens		 Oligo Array spotted oligonucleotide, 3D-Gene Human miRNA Oligo chip v10.1,
20 GPL13285 3D-Gene Mouse miRNA Oligo chip V14.1.0.1 739 Toray Industries,Inc. 2011-03-16 TORAY Industries, Inc. Mus musculus
Mus musculus		 Oligo Array spotted oligonucleotide, 3D-Gene Mouse miRNA Oligo chip V14.1.0.1,
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