Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(16,580)		   Tiling Array
(3,529)		   cDNA Array
(5,792)		   Oligo Array
(11,628)		   Bead Array
(2,848)		   Protein Array
(1)		   Antibody
(37)		   RT-PCR
(223)		   HT-Seq
(4,411)		   Other
(158)		   All
(45,516)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Tiling microarray of Oryza sativa japonica at 46nt resolution (GSE6996) [Tiling Array] Tiling microarray for Oryza sativa japonica genome (version 2 pseudomolecules from TIGR) Chromosome 12 (GPL4816) Yale University 2007-02-09 Oryza sativa
Oryza sativa		 287,600
(287,600 x 1) 		1 by_platform
by_series
2 Tiling microarray of Oryza sativa japonica at 46nt resolution (GSE6996) [Tiling Array] Tiling microarray OS16606 for Oryza sativa japonica genome (version 2 pseudomolecules from TIGR) Chromosome 2 (GPL4822) Yale University 2007-02-09 Oryza sativa
Oryza sativa		 389,287
(389,287 x 1) 		1 by_platform
by_series
3 Tiling microarray of Oryza sativa japonica at 46nt resolution (GSE6996) [Tiling Array] Tiling microarray OS16618 for Oryza sativa japonica genome (version 2 pseudomolecules from TIGR) Chromosome 12 (GPL4823) Yale University 2007-02-09 Oryza sativa
Oryza sativa		 389,287
(389,287 x 1) 		1 by_platform
by_series
4 Tiling microarray of Oryza sativa japonica at 46nt resolution (GSE6996) [Tiling Array] Tiling microarray OS16945 for Oryza sativa japonica genome (version 2 pseudomolecules from TIGR) Chromosome 7 (GPL4825) Yale University 2007-02-09 Oryza sativa
Oryza sativa		 389,287
(389,287 x 1) 		1 by_platform
by_series
5 Transcriptional signature of Drosophila wing disc regeneration (GSE17408) [Oligo Array] 01_Drosophila_16K_Universitat_Barcelona (GPL3797) Universitat de Barcelona 2009-07-30 Drosophila melanogaster
Drosophila melanogaster		 196,992
(16,416 x 12) 		12 by_platform
by_series
6 Analysis of the trithorax Group (trxG) genes ash2 and ash1 wing imaginal disc transcriptomes. (GSE4923) [Oligo Array] 01_Drosophila_16K_Universitat_Barcelona (GPL3797) Universitat de Barcelona 2006-05-25 Drosophila melanogaster
Drosophila melanogaster		 196,992
(16,416 x 12) 		12 by_platform
by_series
7 trx regulatory gene network in D. melanogaster (GSE8783) [Oligo Array] 01_Drosophila_16K_Universitat_Barcelona (GPL3797) Universitat de Barcelona 2007-08-15 Drosophila melanogaster
Drosophila melanogaster		 131,328
(16,416 x 8) 		8 by_platform
by_series
8 Transcriptome of sevenless (sev) in the eye imaginal disc. (GSE37793) [Oligo Array] 01_Drosophila_16K_Universitat_Barcelona (GPL3797) University of Barcelona 2012-05-06 Drosophila melanogaster
Drosophila melanogaster		 114,912
(16,416 x 7) 		7 by_platform
by_series
9 Widespread Generation of Alternative UTRs Contributes to Sex-specific RNA Binding by UNR (GSE30963) [Oligo Array] 01_Drosophila_16K_Universitat_Barcelona (GPL3797) CRG (Centre for Genomic Regulation) 2011-07-26 Drosophila melanogaster
Drosophila melanogaster		 98,496
(16,416 x 6) 		6 by_platform
by_series
10 Whole genome expression profile of dsap18 mutant Drosophila melanogaster embryos (GSE17066) [Oligo Array] 01_Drosophila_16K_Universitat_Barcelona (GPL3797) Universitat de Barcelona 2009-07-13 Drosophila melanogaster
Drosophila melanogaster		 65,664
(16,416 x 4) 		4 by_platform
by_series
11 Chromosomal clustering of genes in trithorax (trx) mutant larvae (GSE8748) [Oligo Array] 01_Drosophila_16K_Universitat_Barcelona (GPL3797) Universitat de Barcelona 2007-08-10 Drosophila melanogaster
Drosophila melanogaster		 65,664
(16,416 x 4) 		4 by_platform
by_series
12 Chromosomal clustering of genes in absent, small, or homeotic discs 2 (ash2) mutant larvae (GSE8750) [Oligo Array] 01_Drosophila_16K_Universitat_Barcelona (GPL3797) Universitat de Barcelona 2007-08-10 Drosophila melanogaster
Drosophila melanogaster		 65,664
(16,416 x 4) 		4 by_platform
by_series
13 Characterizing gene regulatory networks in the brain of largemouth bass inhabiting rivers containing high levels of methyl-mercury (GSE38474) [Oligo Array] 020310-Agilent Micropterus salmoides 15K (GPL15650) University of New Brunswick 2012-06-04 Micropterus salmoides
Micropterus salmoides		 598,272
(15,744 x 38) 		38 by_platform
by_series
14 Characterizing gene regulatory networks in the brain of largemouth bass inhabiting rivers containing high levels of methyl-mercury (field study) (GSE38458) [Oligo Array] 020310-Agilent Micropterus salmoides 15K (GPL15650) University of New Brunswick 2012-06-04 Micropterus salmoides
Micropterus salmoides		 377,856
(15,744 x 24) 		24 by_platform
by_series
15 Characterizing gene regulatory networks in the brain of largemouth bass inhabiting rivers containing high levels of methyl-mercury (lab study) (GSE38456) [Oligo Array] 020310-Agilent Micropterus salmoides 15K (GPL15650) University of New Brunswick 2012-06-04 Micropterus salmoides
Micropterus salmoides		 220,416
(15,744 x 14) 		14 by_platform
by_series
16 Genome-wide expression profiling of Fusarium graminearum in response to azole fungicide treatment (GSE25114) [Oligo Array] 021301-MLU Fusarium graminearum 8x15K v1.0 (GPL11158) Martin-Luther-University Halle-Wittenberg, Institute of Agricultural and Nutritional Sciences 2010-11-03 Gibberella zeae
Gibberella zeae		 79,980
(13,330 x 6) 		6 by_platform
by_series
17 Coupled evolution of transcription and mRNA degradation. (GSE28849) [Oligo Array] 027169-Agilent Yeast Aarray for S.cerevisiae and S.paradoxus (4 X 44K) (GPL13449) Weizmann Institute of Science 2011-04-25 Saccharomyces cerevisiae,Saccharomyces paradoxus
Saccharomyces cerevisiae,Saccharomyces paradoxus		 349,440
(21,840 x 16) 		16 by_platform
by_series
18 Investigating the impact of heterologous expression of the Micrococcus luteus FabH on global transcription in Escherichia coli (GSE32561) [Oligo Array] 071112 Ecoli K12 EXP X4 (GPL14649) Joint BioEnergy Institute 2011-10-03 Escherichia coli K-12
Escherichia coli K-12		 47,234
(4,294 x 11) 		11 by_platform
by_series
19 Effect of FadR overexpression in an engineered fatty acid overproducer (GSE35392) [Oligo Array] 071112 Ecoli K12 EXP X4 (GPL14649) Joint BioEnergy Institute 2012-01-27 Escherichia coli
Escherichia coli		 30,058
(4,294 x 7) 		3 4 by_platform
by_series
20 Recessive resistance to Watermelon mosaic virus in melon is associated with a defense response as revealed by microarray analysis (GSE30111) [Oligo Array] 080616_Melogen_60mer_x4 (GPL13748) CEBAS-CSIC 2011-06-20 Cucumis melo
Cucumis melo		 837,264
(17,443 x 48) 		12 36 by_platform
by_series
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