Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(304)		   Primates
(0)		   Rodents
(246)		   Mammals
(18)		   Vertebrates
(11)		   Invertebrates
(39)		   Plants
(97)		   Bacteria
(50)		   Viruses
(0)		   Phages
(0)		   Unclassified
(3)		   All
(769)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(247)		   Tiling Array
(21)		   cDNA Array
(92)		   Oligo Array
(187)		   Bead Array
(155)		   Protein Array
(0)		   Antibody
(5)		   RT-PCR
(2)		   HT-Seq
(59)		   Other
(1)		   All
(769)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Profiling oxidative stress in Saccharomyces cerevisiae by oxidation of transcription factor Swi6p (GSE18334) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) University of New South Wales 2009-09-29 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 196,704
(10,928 x 18) 		18 by_platform
by_series
2 Phytochemical variations in medicinal herbs affecting bioefficacy: Equisetum arvense extracts in the global market place as a case study (GSE24888) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) University of Western Sydney 2010-10-22 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 196,704
(10,928 x 18) 		18 by_platform
by_series
3 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat (GSE6027) [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) The University of Adelaide 2006-10-13 Triticum aestivum
Triticum aestivum		 1,287,090
(61,290 x 21) 		21 by_platform
by_series
4 Genotypic differences in water soluble carbohydrate metabolism in stem (GSE9767) [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) CSIRO 2007-12-04 Triticum aestivum
Triticum aestivum		 980,640
(61,290 x 16) 		16 by_platform
by_series
5 Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum (GSE13660) [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) CSIRO 2008-11-19 Triticum aestivum
Triticum aestivum		 367,740
(61,290 x 6) 		6 by_platform
by_series
6 Transcripts associated with cell wall metabolism and development in the sugarcane stem by GeneChip expression profiling (GSE5021) [GeneChip] [Sugar_Cane] Affymetrix Sugar Cane Genome Array (GPL3844) CSIRO Plant Industry 2006-06-08 Saccharum hybrid cultivar Q117
Saccharum hybrid cultivar Q117		 100,644
(8,387 x 12) 		8 4 by_platform
by_series
7 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans (GSE10251) [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) University of Melbourne 2008-01-23 Glycine max
Glycine max		 611,700
(61,170 x 10) 		10 by_platform
by_series
8 Genome-wide analysis of gene expression in the soybean shoot apical meristem (GSE10607) [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) University of Melbourne 2008-02-22 Glycine max
Glycine max		 367,020
(61,170 x 6) 		4 2 by_platform
by_series
9 Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen (GSE12286) [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) University of Melbourne 2008-07-30 Glycine max
Glycine max		 305,850
(61,170 x 5) 		3 2 by_platform
by_series
10 Expression data of Soybean root apical meristem and leaf (GSE27894) [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) Melbourne University 2011-03-10 Glycine max
Glycine max		 305,850
(61,170 x 5) 		5 by_platform
by_series
11 Expression data in response to Xoo. bacterial infection in rice (GSE43050) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) University of Western Australia 2012-12-20 Oryza sativa
Oryza sativa		 1,377,144
(57,381 x 24) 		24 by_platform
by_series
12 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress (GSE14403) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) University of Adelaide 2009-01-13 Oryza sativa Indica Group
Oryza sativa Indica Group		 1,319,763
(57,381 x 23) 		23 by_platform
by_series
13 Effects of ACTH and DEX on gene expression in rat kidneys (GSE6216) [GeneChip] [RG_U34A] Affymetrix Rat Genome U34 Array (GPL85) University of Canberra 2006-11-02 Rattus norvegicus
Rattus norvegicus		 140,784
(8,799 x 16) 		16 by_platform
by_series
14 Global colorectal cancer gene expression in rats (GSE15184) [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) CSIRO 2009-03-11 Rattus norvegicus
Rattus norvegicus		 1,181,762
(31,099 x 38) 		38 by_platform
by_series
15 Irinotecan-induced gene expression changes in the rat intestine (GSE11722) [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) Royal Adelaide Hospital 2008-06-09 Rattus norvegicus
Rattus norvegicus		 932,970
(31,099 x 30) 		30 by_platform
by_series
16 Azoxymethane induced changes in Rat proximal and distal colonic epithelium. (GSE13802) [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) CSIRO 2008-12-02 Rattus norvegicus
Rattus norvegicus		 559,782
(31,099 x 18) 		18 by_platform
by_series
17 Rat prostate cancer cells with high Ndrg-1 and vector control - analysis of differentially expressed genes (GSE9076) [GeneChip] [Rat230_2] Affymetrix Rat Genome 230 2.0 Array (GPL1355) University of Sydney 2007-09-18 Rattus norvegicus
Rattus norvegicus		 62,198
(31,099 x 2) 		2 by_platform
by_series
18 Gene Expression in Rats Fed a Western Diet (GSE32312) [GeneChip] [RaGene-1_0-st] Affymetrix Rat Gene 1.0 ST Array [transcript (gene) version] (GPL6247) CSIRO 2011-09-22 Rattus norvegicus
Rattus norvegicus		 1,256,245
(29,215 x 43) 		43 by_platform
by_series
19 Comparison of Saffron and Photobiomodulation on the light damaged rat retina. (GSE22818) [GeneChip] [RaGene-1_0-st] Affymetrix Rat Gene 1.0 ST Array [transcript (gene) version] (GPL6247) ANU 2010-07-08 Rattus norvegicus
Rattus norvegicus		 525,870
(29,215 x 18) 		18 by_platform
by_series
20 Use of microarray analyses to determine the effect of hyperoxia and hypoxia on gene expression in early oxygen-induced retinopathy (OIR). (GSE36037) [GeneChip] [RaGene-1_0-st] Affymetrix Rat Gene 1.0 ST Array [transcript (gene) version] (GPL6247) Flinders University 2012-02-23 Rattus norvegicus
Rattus norvegicus		 467,440
(29,215 x 16) 		16 by_platform
by_series
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