Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(16,580)		   Tiling Array
(3,529)		   cDNA Array
(5,792)		   Oligo Array
(11,628)		   Bead Array
(2,848)		   Protein Array
(1)		   Antibody
(37)		   RT-PCR
(223)		   HT-Seq
(4,411)		   Other
(158)		   All
(45,516)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Removing System Noise from Comparative Genomic Hybridization Data by Self-Self Analysis (GSE23682) [Oligo Array] NimbleGen Human 2.1M array [080131_HG18_WG_CGH_v2DCR_HX1] (GPL10815) Cold Spring Harbor Lab 2010-08-18 Homo sapiens
Homo sapiens		 2,147,483,647
(2,161,679 x 3,852) 		3,852 by_platform
by_series
2 Transcriptional termini of genes on chromosomes 21-22 (RACE mapping) (GSE17600) [GeneChip] AFFYMETRIX Human Chromosomes 21 & 22 v2.0 (GPL5715) Cold Spring Harbor Labs 2009-08-11 Homo sapiens
Homo sapiens		 2,147,483,647
(2,233,195 x 1,020) 		204 102 102 408 204 by_platform
by_series
3 Subgroup specific somatic copy number aberrations in the medulloblastoma genome (GSE37385) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) The Hospital for Sick Children 2012-04-18 Homo sapiens
Homo sapiens		 2,063,231,018
(1,880,794 x 1,097) 		1,097 by_platform
by_series
4 Subgroup specific somatic copy number aberrations in the medulloblastoma genome [gDNA] (GSE37384) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) The Hospital for Sick Children 2012-04-18 Homo sapiens
Homo sapiens		 2,063,231,018
(1,880,794 x 1,097) 		1,097 by_platform
by_series
5 Spatio-temporal transcriptome of the human brain (GSE25219) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Yale University 2010-11-09 Homo sapiens
Homo sapiens		 1,919,087,700
(1,432,155 x 1,340) 		1,340 by_platform
by_series
6 Refinement and discovery of new hotspots of copy number variation associated with autism spectrum disorder (GSE39655) [Oligo Array] Agilent-027478 Homo sapiens 420K HOTSPOT3.1_SG (GPL15849) University of Washington 2012-07-25 Homo sapiens
Homo sapiens		 1,808,078,976
(420,288 x 4,302) 		197 4,105 by_platform
by_series
7 Large rare Deletions in Ashkenazi Jewish schizophrenia cases vs controls (GSE23201) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Emory Univeristy School of Medicine 2010-07-27 Homo sapiens
Homo sapiens		 1,382,383,590
(1,880,794 x 735) 		735 by_platform
by_series
8 High-Resolution Genomic Profiling of Adult and Pediatric Core-Binding-Factor Acute Myeloid Leukemia Reveals New Recurrent Genomic Alterations (GSE32462) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) St Jude Children's Research Hospital 2011-09-28 Homo sapiens
Homo sapiens		 970,489,704
(1,880,794 x 516) 		516 by_platform
by_series
9 Acquired genomic copy number aberrations and survival in chronic lymphocytic leukemia (GSE30777) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of Michigan 2011-07-19 Homo sapiens
Homo sapiens		 959,204,940
(1,880,794 x 510) 		499 11 by_platform
by_series
10 High-Resolution Genomic Profiling of Chronic Lymphocytic Leukemia Reveals New Recurrent Genomic Alterations (GSE36908) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Ulm University 2012-03-28 Homo sapiens
Homo sapiens		 940,397,000
(1,880,794 x 500) 		500 by_platform
by_series
11 Population genetic structure of the Ashkenazi Jewish population (GSE23636) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Emory University School of Medicine 2010-08-16 Homo sapiens
Homo sapiens		 885,853,974
(1,880,794 x 471) 		471 by_platform
by_series
12 Genome-wide survey of large rare copy number variations in Alzheimer’s disease among Caribbean Hispanics (GSE33528) [Bead Array] Illumina HumanHap650Yv2 Genotyping BeadChip (HumanHap650Y_v2-0_GenotypingBC_11237679_A) (GPL14932) Tanz Centre for Neurodegenerative Diseases 2011-11-07 Homo sapiens
Homo sapiens		 805,351,815
(662,841 x 1,215) 		1,215 by_platform
by_series
13 Cancer Genome Anatomy Project (CGAP) SAGE Libraries (GSE14) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) National Cancer Institute 2001-11-29 Homo sapiens
Homo sapiens		 771,423,468
(6,221,157 x 124) 		12 23 17 5 1 8 4 1 6 32 11 3 1 by_platform
by_series
14 Gastrointestinal Adenocarcinomas of the Esophagus, Stomach, and Colon Exhibit Distinct Patterns of Genome Instability and Oncogenesis. (GSE36460) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Dana-Farber Cancer Institute 2012-03-13 Homo sapiens
Homo sapiens		 622,542,814
(1,880,794 x 331) 		271 60 by_platform
by_series
15 Affymetrix SNP 6.0 array data for colon, gastric and esophageal adenocarcinoma cancer types (GSE36458) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Dana-Farber Cancer Institute 2012-03-13 Homo sapiens
Homo sapiens		 622,542,814
(1,880,794 x 331) 		271 60 by_platform
by_series
16 Cancer Genome Anatomy Project (CGAP) Human LongSAGE (GSE1902) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) National Cancer Institute 2004-10-28 Homo sapiens
Homo sapiens		 547,461,816
(6,221,157 x 88) 		11 15 2 1 1 8 4 1 1 32 9 3 by_platform
by_series
17 Genetic Landscape of Copy Number Alterations in Gastric Cancer (GSE31168) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Duke NUS Graduate Medical School 2011-08-03 Homo sapiens
Homo sapiens		 547,311,054
(1,880,794 x 291) 		291 by_platform
by_series
18 Frequent and Focal FGFR1 Amplification Associates With Therapeutically Tractable FGFR1 Dependency in Squamous-cell Lung Cancer. (GSE25016) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Max-Planck Institute for neurological research 2010-10-29 Homo sapiens
Homo sapiens		 547,311,054
(1,880,794 x 291) 		232 59 by_platform
by_series
19 Integrative Analysis of a series of newly diagnosed Diffuse Large B-cell Lymphomas (DLBCLs) (GSE34171) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Dana-Farber Cancer Institute 2011-12-05 Homo sapiens
Homo sapiens		 494,648,822
(1,880,794 x 263) 		28 235 by_platform
by_series
20 Mouse Atlas of Gene Expression Project (GSE4726) [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) Canada's Michael Smith Genome Sciences Centre 2006-04-26 Mus musculus
Mus musculus		 490,560,048
(2,477,576 x 198) 		70 9 5 14 11 12 3 7 15 22 17 13 by_platform
by_series
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