Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(128)		   Primates
(2)		   Rodents
(68)		   Mammals
(0)		   Vertebrates
(0)		   Invertebrates
(0)		   Plants
(97)		   Bacteria
(0)		   Viruses
(0)		   Phages
(1)		   Unclassified
(0)		   All
(385)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(0)		   Tiling Array
(0)		   cDNA Array
(92)		   Oligo Array
(208)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(2)		   All
(385)		  
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL16933 [ZebGene-1_0-st] Zebrafish Gene 1.0 ST Array [transcript (gene) version] 75,212 Affymetrix Japan 2013-03-29 Affymetrix Danio rerio
Danio rerio		 GeneChip in situ oligonucleotide, [ZebGene-1_0-st] Zebrafish Gene 1.0 ST Array [transcript (gene) version], Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html Jan 29, 2013: annotation table updated with netaffx build 33
2 GPL4685 [U133AAofAv2] Affymetrix GeneChip HT-HG_U133A Early Access Array 22,944 Affymetrix Japan 2006-12-20 Affymetrix Homo sapiens
Homo sapiens		 GeneChip in situ oligonucleotide, [U133AAofAv2] Affymetrix GeneChip HT-HG_U133A Early Access Array, HT-HG_U133A (early access version) high-throughput array (Affy part number 520276)
3 GPL9209 [TTHB8401a520105F] Riken Thermus thermophilus HB8 4K mRNA custom array, library Rev.2 3,492 RIKEN Harima Institute 2009-09-17 Affymetrix Thermus thermophilus HB8
Thermus thermophilus HB8		 GeneChip in situ oligonucleotide, [TTHB8401a520105F] Riken Thermus thermophilus HB8 4K mRNA custom array, library Rev.2,
4 GPL14866 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [CDF: MoGene10stv1_Mm_ENSG version 14] 22,308 Affymetrix Japan 2011-11-09 Affymetrix Mus musculus
Mus musculus		 GeneChip in situ oligonucleotide, [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [CDF: MoGene10stv1_Mm_ENSG version 14],
5 GPL16788 [FinGene-1_0-st] Zebra Finch Gene 1.0 ST Array [transcript (gene) version] 28,296 Affymetrix Japan 2013-03-14 Affymetrix Taeniopygia guttata
Taeniopygia guttata		 GeneChip in situ oligonucleotide, [FinGene-1_0-st] Zebra Finch Gene 1.0 ST Array [transcript (gene) version], Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html #%create_date=Thu Oct 20 14:39:28 PDT 2011 #%chip_type=FinGene-1_0-st-v1 #%lib_set_name=FinGene-1_0-st #%lib_set_version=v1 #%genome-species=Taeniopygia guttata #%genome-version=taeGut1 #%genome-version-create_date=2008-07-00 #%annotation-version=design-time
6 GPL14810 [Eh_Eia520620F_Ei] Affymetrix Entamoeba invadens Array 12,483 National Institute of Infectious Diseases 2011-10-28 Affymetrix Entamoeba invadens
Entamoeba invadens		 GeneChip in situ oligonucleotide, [Eh_Eia520620F_Ei] Affymetrix Entamoeba invadens Array, EIN_nnnn identifiers represent TIGR locus_tag
7 GPL14609 [Eh_Eia520620F_Eh] Custom Entamoeba histolytica Eh_Eia520620F_Eh Array 9,327 National Institute of Infectious Diseases 2011-09-22 Affymetrix Entamoeba histolytica
Entamoeba histolytica		 GeneChip in situ oligonucleotide, [Eh_Eia520620F_Eh] Custom Entamoeba histolytica Eh_Eia520620F_Eh Array,
8 GPL13284 [CentXbaAv2] Affymetrix Human CentXbaAv2 SNP Array 59,015 RIKEN Brain Science Institute 2011-03-15 Affymetrix Homo sapiens
Homo sapiens		 GeneChip in situ oligonucleotide, [CentXbaAv2] Affymetrix Human CentXbaAv2 SNP Array, Affymetrix Early Access 50KXba array. These arrays are the same as the commercial Mapping 100K arrays with the exception of some the probes being masked out. The data obtained from Affymetrix Early Access 50KXba and 50KHind arrays can be converted to Mapping 100K arrays by filtering out the rejected SNP probe IDs on Early Access array and converting the SNP IDs to Mapping 100K SNP IDs.
9 GPL13283 [CentHindAv2] Affymetrix Human CentHindAv2 SNP Array 57,299 RIKEN Brain Science Institute 2011-03-15 Affymetrix Homo sapiens
Homo sapiens		 GeneChip in situ oligonucleotide, [CentHindAv2] Affymetrix Human CentHindAv2 SNP Array, Affymetrix Early Access 50KHind array. These arrays are the same as the commercial Mapping 100K arrays with the exception of some the probes being masked out. The data obtained from Affymetrix Early Access 50KXba and 50KHind arrays can be converted to Mapping 100K arrays by filtering out the rejected SNP probe IDs on Early Access array and converting the SNP IDs to Mapping 100K SNP IDs.
10 GPL16184 [Aoryzaea520360F] Affymetrix Aspergillus oryzae DNAchip 13,725 National Research Institute of Brewing 2012-10-16 Affymetrix Aspergillus oryzae RIB40
Aspergillus oryzae RIB40		 GeneChip in situ oligonucleotide, [Aoryzaea520360F] Affymetrix Aspergillus oryzae DNAchip,
11 GPL4747 YN Human 36K (sets1-8) 36,864 The University of Tokyo 2007-01-15 Laboratoryof Molecular Medicine, Instutute of Medical Science, the University of Tokyo Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, YN Human 36K (sets1-8), Human genome-wide cDNA microarray with 36,864 elements spotted (sets1-8)
12 GPL6340 YCU Human 4.2K version 1 4,234 Yokohama City University 2008-01-04 Department of Human Genetics, Yokohama City University Homo sapiens
Homo sapiens		 cDNA Array spotted DNA/cDNA, YCU Human 4.2K version 1,
13 GPL10726 Xenopus Gene Expression Microarray (AMADID: 015066) 21,495 Shizuoka University 2010-07-26 Agilent Technologies Inc. Xenopus laevis
Xenopus laevis		 Oligo Array in situ oligonucleotide, Xenopus Gene Expression Microarray (AMADID: 015066),
14 GPL5036 Whole rice locus 44K array 2 44,290 National Institute of Agrobiological Sciences 2007-03-25 Agilent Technologies Oryza sativa
Oryza sativa		 Oligo Array in situ oligonucleotide, Whole rice locus 44K array 2, Keyword: Oryza sativa ssp. Japonica cv. Nipponbare Keyword: rice full-length cDNA sequences Keyword: TIGR pseudomolecules release 4
15 GPL5033 Whole rice locus 44K array 1 44,290 National Institute of Agrobiological Sciences 2007-03-25 Agilent Technologies Oryza sativa
Oryza sativa		 Oligo Array in situ oligonucleotide, Whole rice locus 44K array 1, Keyword: Oryza sativa ssp. Japonica cv. Nipponbare Keyword: rice full-length cDNA sequences Keyword: TIGR pseudomolecules release 4
16 GPL5343 wheat 22k 22,575 Kihara Institute for Biological Research, Yokohama City University 2007-05-31 Agilent Technologies Triticum aestivum
Triticum aestivum		 Oligo Array in situ oligonucleotide, wheat 22k ,
17 GPL5344 wheat 11k 10,807 Kihara Institute for Biological Research, Yokohama City University 2007-05-31 Agilent Technologies Triticum aestivum
Triticum aestivum		 Oligo Array in situ oligonucleotide, wheat 11k,
18 GPL6058 Vibrio parahaemolyticus RIMD2210633 5k microarray 4,866 Osaka University 2007-10-29 Molecular Gene Technics, Department of Genetic Resources Technology, Faculty of Agriculture, Kyushu University, Fukuoka, Japan. Vibrio parahaemolyticus RIMD 2210633
Vibrio parahaemolyticus RIMD 2210633		 cDNA Array spotted DNA/cDNA, Vibrio parahaemolyticus RIMD2210633 5k microarray,
19 GPL9862 University of Alberta Bovine 24K long oligo array 49,152 National Institute of Agrobiological Sciences 2010-01-08 Oligo design: Bovine Oligo Microarray Consortium; Array preparation: University of Alberta, Agricultural Genomics and Proteomics Unit Bos taurus
Bos taurus		 Oligo Array spotted oligonucleotide, University of Alberta Bovine 24K long oligo array, UniGene ID of sequence used to design oligonucleotide probe, Gene symbol, GenBank accession number and gene description were annotated in the GeneSifter based on the UniGene ID. The oligonucleotide sequences are provided as a supplementary file.
20 GPL13528 UIUC Honey Bee oligo 13K v1 12,805 Nagoya University 2011-05-12 University of Illinois Keck Center for Comparative and Functional Genomics Apis mellifera
Apis mellifera		 Oligo Array spotted oligonucleotide, UIUC Honey Bee oligo 13K v1,
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