Gene Expression Omnibus (GEO) Overview

RSS

[ Top ] > [ 2009-07 ]

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(16,840)

Invertebrates
(1,922)

Phages
(0)

All
(29,683)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

Protein Array
(0)

Antibody
(0)

All
(29,683)

endo/exo-crine
(1,502)

embryo
(644)

adult aerial structure
(490)

young aerial structure
(135)

root
(49)

meristem/growing tissue
(107)

flower/sexual organ
(169)

seed/fruit/grain
(184)

pooled
(1,464)

unclassified
(11,599)

all
(29,683)

1 | 2 | 3 | 4 | 5 » [25]

	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM433620	Small RNAs from maize leaves	1,247,806	University of Delaware	2009-07-27	[HT Sequencing] Illumina Genome Analyzer II (Zea mays) (GPL9361)	SRA	Zea mays	leaf	Leaves
2	GSM451894	small_RNAs_leaves	382,520	Pennsylvania State University	2009-09-11	[HT Sequencing] Illumina Genome Analyzer (Arabidopsis lyrata) (GPL9180)	SRA	Arabidopsis lyrata	leaf	rosette leaves
3	GSM431163	SCTLS-1 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
4	GSM431164	CEARS-2 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
5	GSM431165	CAMIS-2 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
6	GSM431166	SAMOS-1 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
7	GSM431167	SCTLS-2 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
8	GSM431168	CEARS-1 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
9	GSM431169	CAMIS-1 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
10	GSM431170	SAMOS-2 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
11	GSM431171	CCTLS-1 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
12	GSM431172	SAMIS-1 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
13	GSM431173	SAMIS-2 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
14	GSM431174	CAMOS-1 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
15	GSM431175	SEARS-2 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
16	GSM431176	CAMOS-2 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
17	GSM431177	CCTLS-2 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
18	GSM431178	SEARS-1 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	leaf	This project aims to identify genes of interest for water deficit acclimation and/or adaptation in a tree species: poplar. We look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in laser-microdissected stomata, in two genotypes, Carpaccio and Soligo, at various stages and intensities of stress. In response to water deficit, water loss is adjusted through stomatal conductance. Transcriptome of pure stomatal material should bring valuable information hardly reachable in whole leaf transcriptome analysis. The comparison between medium and severe stress intensities and between early and long term stresses will power the selection of genes of interest. The co-analysis of two genotypes of contrasted tolerance to water deficit should help to discriminate genes presenting a potential adaptative character from genes responding passively to the constraint.
19	GSM431179	JXSAMO_2 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	other adult aerial structure	This project aims to identify candidate genes for water deficit acclimation and/or adaptation in a tree species: poplar. Due to compelling evidence that transcriptional regulation plays a major role in regulating many biological processes, we will look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in two poplar genotypes of contrasted tolerance to water deficit, at various stages and intensities of stress and simultaneously in whole xylem and cambial zone from young trees. The co-analysis of two genotypes of contrasted tolerance to water deficit should allow to better discriminating genes presenting a potential adaptative character from genes responding passively to the constraint. The consideration of both whole xylem and cambial zone will enable us to discriminate between regulations events originating from very young xylem cells undergoing their first steps of xylem differentiation (cambial zone) compared to whole xylem sample enriched in more differentiated xylem cells and parenchyma ray cells.
20	GSM431180	JXSAMI_1 with array type poplar from Affymetrix	61,413	INRA	2009-07-21	[GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359)	RNA	Populus x canadensis	other adult aerial structure	This project aims to identify candidate genes for water deficit acclimation and/or adaptation in a tree species: poplar. Due to compelling evidence that transcriptional regulation plays a major role in regulating many biological processes, we will look for genes and gene expression networks related to drought stress. We intend to analyse the transcriptome in two poplar genotypes of contrasted tolerance to water deficit, at various stages and intensities of stress and simultaneously in whole xylem and cambial zone from young trees. The co-analysis of two genotypes of contrasted tolerance to water deficit should allow to better discriminating genes presenting a potential adaptative character from genes responding passively to the constraint. The consideration of both whole xylem and cambial zone will enable us to discriminate between regulations events originating from very young xylem cells undergoing their first steps of xylem differentiation (cambial zone) compared to whole xylem sample enriched in more differentiated xylem cells and parenchyma ray cells.

1 | 2 | 3 | 4 | 5 » [25]